RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 GRM7Q14831 915 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 SLC9A5Q14940 896 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 C18orf21Q32NC0 220 aaPredicted RBP14.12□□□□□ -0.15
USP4-212ENST00000486549 WASHC2DQ5SRD0 308 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 RHBDD2Q6NTF9 364 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 FBXO42Q6P3S6 717 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 TTLL10Q6ZVT0 673 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 TAOK1Q7L7X3 1001 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 GPSM1Q86YR5 675 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 METTL27Q8N6F8 245 aaPredicted RBP14.12□□□□□ -0.15
USP4-212ENST00000486549 KCTD4Q8WVF5 259 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 TTC9Q92623 222 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 PTERQ96BW5 349 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 UBXN10Q96LJ8 280 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 HAUS8Q9BT25 410 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 ALG9Q9H6U8 611 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 SYNPO2LQ9H987 977 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 CUTCQ9NTM9 273 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 TMEM184CQ9NVA4 438 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 KCND3Q9UK17 655 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 TLK1Q9UKI8 766 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 RNF112Q9ULX5 631 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 ACOT9Q9Y305 439 aa14.12□□□□□ -0.15
USP4-212ENST00000486549 A0A087X1B8 175 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 C21orf140B9A014 251 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 SEC16AO15027 2179 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 SRPX2O60687 465 aaPredicted RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 SLU7O95391 586 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 STATHP02808 62 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ALDOAP04075 364 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 C2P06681 752 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ABHD2P08910 425 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 LTA4HP09960 611 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 NPPBP16860 134 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 TFEBP19484 476 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 TYK2P29597 1187 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 SERPINB9P50453 376 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 RPS15P62841 145 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 CDKL1Q00532 357 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 TGFBIQ15582 683 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 FBXO48Q5FWF7 155 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ATP1A1-AS1Q5TC04 95 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ZNF385CQ66K41 422 aaPredicted RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 FAM198BQ6UWH4 519 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ENDOVQ8N8Q3 282 aaKnown RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 PROKR1Q8TCW9 393 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 RERGQ96A58 199 aaPredicted RBP14.11□□□□□ -0.15
USP4-212ENST00000486549 NXNL1Q96CM4 212 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 TSNARE1Q96NA8 513 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ZNF285Q96NJ3 590 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 GBP5Q96PP8 586 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 OR4K3Q96R72 315 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ARHGAP9Q9BRR9 750 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 VPS11Q9H270 941 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ACTL8Q9H568 366 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 ANKZF1Q9H8Y5 726 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 IGSF5Q9NSI5 407 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 WWOXQ9NZC7 414 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 CD274Q9NZQ7 290 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 DYRK1BQ9Y463 629 aa14.11□□□□□ -0.15
USP4-212ENST00000486549 A0A096LPK6 155 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 A0A1B0GX78 115 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 FEZF1A0PJY2 475 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 HYKKA2RU49 373 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 CDC14CA4D256 554 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 C9J4A7 227 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 KRT38O76015 456 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 WDR47O94967 919 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 HRH2P25021 359 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 GDF5P43026 501 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 GLRBP48167 497 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 HNMTP50135 292 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 ARSFP54793 590 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 CSNK1G2P78368 415 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 NFKB2Q00653 900 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 MEF2AQ02078 507 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 CDC20Q12834 499 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 ERV3-1Q14264 604 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 HKDC1Q2TB90 917 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 FAM69BQ5VUD6 431 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 MLIPQ5VWP3 458 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 ZNF517Q6ZMY9 492 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 ZNF605Q86T29 641 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 THOC6Q86W42 341 aaKnown RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 CENPLQ8N0S6 344 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 DTWD1Q8N5C7 304 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 CSNK1A1LQ8N752 337 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 DCAKDQ8WVC6 231 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 KIAA1191Q96A73 305 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 RHBDF1Q96CC6 855 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 CABS1Q96KC9 395 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 OR2A5Q96R48 311 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 DPH2Q9BQC3 489 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 TXLNGYQ9BZA5 131 aa14.1□□□□□ -0.15
USP4-212ENST00000486549 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.1□□□□□ -0.15
USP4-212ENST00000486549 GPN3Q9UHW5 284 aaPredicted RBP14.1□□□□□ -0.15
USP4-212ENST00000486549 SLC22A14Q9Y267 594 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms