RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 BSNQ9UPA5 3926 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 SNRNP200O75643 2136 aaKnown RBP16.84■□□□□ 0.29
COL6A1-204ENST00000486023 NDC80O14777 642 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 ALOX12BO75342 701 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 FDXRP22570 491 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 OCA2Q04671 838 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 ZNF460Q14592 562 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 ZNF425Q6IV72 752 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 PPP1R32Q7Z5V6 425 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 CCDC25Q86WR0 208 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 PYCR2Q96C36 320 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 OR2A5Q96R48 311 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 MACROD1Q9BQ69 325 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 TRIM54Q9BYV2 358 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 CLMPQ9H6B4 373 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 GPR83Q9NYM4 423 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 LUZP4Q9P127 313 aa16.84■□□□□ 0.29
COL6A1-204ENST00000486023 RUVBL1Q9Y265 456 aaKnown RBP16.84■□□□□ 0.29
COL6A1-204ENST00000486023 FEZF1A0PJY2 475 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 TTLL8A6PVC2 850 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 SLC16A5O15375 505 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 ALBP02768 609 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 EZRP15311 586 aaKnown RBP16.83■□□□□ 0.28
COL6A1-204ENST00000486023 FBLP22087 321 aaKnown RBP16.83■□□□□ 0.28
COL6A1-204ENST00000486023 SSTR1P30872 391 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 CSRP3P50461 194 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 PLTPP55058 493 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 RBBP7Q16576 425 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 NADK2Q4G0N4 442 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 VWA2Q5GFL6 755 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 DCAF10Q5QP82 559 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 GALNT7Q86SF2 657 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 FKBP10Q96AY3 582 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 MIEF2Q96C03 454 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 MMABQ96EY8 250 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-204ENST00000486023 C10orf90Q96M02 699 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 IP6K3Q96PC2 410 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 WHRNQ9P202 907 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
COL6A1-204ENST00000486023 UTP11Q9Y3A2 253 aaKnown RBP16.83■□□□□ 0.28
COL6A1-204ENST00000486023 PCDHGA9Q9Y5G4 932 aaKnown RBP16.83■□□□□ 0.28
COL6A1-204ENST00000486023 SEC16AO15027 2179 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 A0A0A6YYC8 382 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-204ENST00000486023 FAM95CA0A1B0GW59 222 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 I3L1I5 382 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-204ENST00000486023 ANXA5P08758 320 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 SP140Q13342 867 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 PRTGQ2VWP7 1150 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 PRMT9Q6P2P2 845 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 C17orf64Q86WR6 236 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 GALNT16Q8N428 558 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 STT3BQ8TCJ2 826 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 ZNF592Q92610 1267 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 SPSB2Q99619 263 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 CRB3Q9BUF7 120 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 UNKQ9C0B0 810 aaKnown RBP16.82■□□□□ 0.28
COL6A1-204ENST00000486023 ATP13A2Q9NQ11 1180 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 TMEM184CQ9NVA4 438 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 MOCS1Q9NZB8 636 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 MAP10Q9P2G4 905 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 TRPC4Q9UBN4 977 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 ZNF282Q9UDV7 671 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-204ENST00000486023 IKZF3Q9UKT9 509 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 CORO1CQ9ULV4 474 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-204ENST00000486023 CDC14AQ9UNH5 594 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 PLAAQ9Y263 795 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 ZNF451Q9Y4E5 1061 aa16.82■□□□□ 0.28
COL6A1-204ENST00000486023 E7ESA3 106 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 AGPSO00116 658 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 P2RX6O15547 441 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 TSPAN12O95859 305 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 ZGLP1P0C6A0 271 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 CDH1P12830 882 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 MMP11P24347 488 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 ITGA3P26006 1051 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 SLC12A2P55011 1212 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 MEF2AQ02078 507 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-204ENST00000486023 KLC1Q07866 573 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 TRADDQ15628 312 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 SYT16Q17RD7 645 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 FAAH2Q6GMR7 532 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 CAPN13Q6MZZ7 669 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-204ENST00000486023 TMEM207Q6UWW9 146 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 ZC3HC1Q86WB0 502 aaKnown RBP16.81■□□□□ 0.28
COL6A1-204ENST00000486023 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 C16orf45Q96MC5 204 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-204ENST00000486023 PCBD2Q9H0N5 130 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 WDR54Q9H977 334 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 SMYD2Q9NRG4 433 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 TXNDC16Q9P2K2 825 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 C3orf18Q9UK00 162 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 FBXL4Q9UKA2 621 aa16.81■□□□□ 0.28
COL6A1-204ENST00000486023 NPEPPSL1A6NEC2 478 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 CDC7O00311 574 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 TXNDC9O14530 226 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 CEACAM4O75871 244 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 URI1O94763 535 aaPredicted RBP16.8■□□□□ 0.28
COL6A1-204ENST00000486023 IGHEP01854 428 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 SERPIND1P05546 499 aa16.8■□□□□ 0.28
COL6A1-204ENST00000486023 TAS2R39P59534 338 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms