RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 DSG2Q14126 1118 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 ELOAQ14241 798 aaKnown RBP24.46■■□□□ 1.51
HLA-F-227ENST00000485513 LONRF1Q17RB8 773 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 HKDC1Q2TB90 917 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 ATG9BQ674R7 924 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 SPNS2Q8IVW8 549 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 LMNTD2Q8IXW0 634 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 CALML6Q8TD86 181 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 C8orf44Q96CB5 159 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 OR2A5Q96R48 311 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 GPR21Q99679 349 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 YIPF2Q9BWQ6 316 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 ZNF160Q9HCG1 818 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 AGPAT4Q9NRZ5 378 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 ABCF3Q9NUQ8 709 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 TRPC4Q9UBN4 977 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 PCYOX1Q9UHG3 505 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 COMMD10Q9Y6G5 202 aa24.46■■□□□ 1.51
HLA-F-227ENST00000485513 GFYI3L273 518 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 PGRMC1O00264 195 aaKnown RBP24.45■■□□□ 1.5
HLA-F-227ENST00000485513 ABATP80404 500 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 RELAQ04206 551 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 GARNL3Q5VVW2 1013 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 ISLR2Q6UXK2 745 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 ADCK2Q7Z695 626 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 LAPTM4BQ86VI4 370 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 AGGF1Q8N302 714 aaeCLIP24.45■■□□□ 1.5
HLA-F-227ENST00000485513 CNDP1Q96KN2 507 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 FBXO5Q9UKT4 447 aa24.45■■□□□ 1.5
HLA-F-227ENST00000485513 A1L4Q6 167 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 ZBTB14O43829 449 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 EMP2P54851 167 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 ZNF169Q14929 603 aaPredicted RBP24.44■■□□□ 1.5
HLA-F-227ENST00000485513 THEMIS2Q5TEJ8 643 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 CYHR1Q6ZMK1 362 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 LINC00696Q6ZRV3 163 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 NAT8LQ8N9F0 302 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 CD200R1Q8TD46 325 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 MMABQ96EY8 250 aaPredicted RBP24.44■■□□□ 1.5
HLA-F-227ENST00000485513 SIGLEC10Q96LC7 697 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 C14orf105Q9NVL8 296 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 ERRFI1Q9UJM3 462 aaPredicted RBP24.44■■□□□ 1.5
HLA-F-227ENST00000485513 DOPEY1Q5JWR5 2465 aa24.44■■□□□ 1.5
HLA-F-227ENST00000485513 UNC79Q9P2D8 2635 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 NSG1A0A0A6YYJ2 146 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 IDSB3KWA1 339 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 TXNDC9O14530 226 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 FFAR3O14843 346 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 GPR42O15529 346 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 ANXA5P08758 320 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 SLC26A3P40879 764 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 SKIV2L2P42285 1042 aaKnown RBP24.43■■□□□ 1.5
HLA-F-227ENST00000485513 TSFMP43897 325 aaKnown RBP24.43■■□□□ 1.5
HLA-F-227ENST00000485513 MPP1Q00013 466 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 MFAP5Q13361 173 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 UBE2R2Q712K3 238 aaPredicted RBP24.43■■□□□ 1.5
HLA-F-227ENST00000485513 KBTBD2Q8IY47 623 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 LRRC56Q8IYG6 542 aaPredicted RBP24.43■■□□□ 1.5
HLA-F-227ENST00000485513 CPNE9Q8IYJ1 553 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 AMER3Q8N944 861 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 LMF1Q96S06 567 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 EBNA1BP2Q99848 306 aaKnown RBP24.43■■□□□ 1.5
HLA-F-227ENST00000485513 FAM167BQ9BTA0 163 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 DRC3Q9H069 523 aa24.43■■□□□ 1.5
HLA-F-227ENST00000485513 NBPF19A0A087WUL8 3843 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 HAT1O14929 419 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 KLHL18O94889 574 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 HAUS5O94927 633 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 CXCR2P25025 360 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 IMPA1P29218 277 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 CDC16Q13042 620 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 TLR1Q15399 786 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 HSP90AA5PQ58FG0 334 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 B3GNTL1Q67FW5 361 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-227ENST00000485513 NDUFAF7Q7L592 441 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 PIWIL4Q7Z3Z4 852 aaKnown RBP24.42■■□□□ 1.5
HLA-F-227ENST00000485513 PPIL6Q8IXY8 311 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 ARHGEF39Q8N4T4 335 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.42■■□□□ 1.5
HLA-F-227ENST00000485513 GRK7Q8WTQ7 553 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 AARSD1Q9BTE6 412 aaKnown RBP24.42■■□□□ 1.5
HLA-F-227ENST00000485513 MKKSQ9NPJ1 570 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-227ENST00000485513 SLC5A6Q9Y289 635 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 POLEQ07864 2286 aa24.42■■□□□ 1.5
HLA-F-227ENST00000485513 TEX15Q9BXT5 2789 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 A0A0A6YYC8 382 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-227ENST00000485513 I3L1I5 382 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-227ENST00000485513 EIF3FO00303 357 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-227ENST00000485513 P2RX6O15547 441 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 FOXS1O43638 330 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 LDLRP01130 860 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 HEXBP07686 556 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 COX6A1P12074 109 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 FNTAP49354 379 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 KCNMB4Q86W47 210 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 PLD3Q8IV08 490 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 ST6GALNAC3Q8NDV1 305 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 C5orf34Q96MH7 638 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 TGIF2Q9GZN2 237 aa24.41■■□□□ 1.5
HLA-F-227ENST00000485513 IARS2Q9NSE4 1012 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms