RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GIMAP7Q8NHV1 300 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 ZNF480Q8WV37 535 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 MVB12AQ96EY5 273 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 MAGEB10Q96LZ2 347 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-205ENST00000485397 SLX1AQ9BQ83 275 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 OLAHQ9NV23 265 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 PCYOX1Q9UHG3 505 aa18.28■□□□□ 0.52
COL27A1-205ENST00000485397 CREBBPQ92793 2442 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 IGHV1-45A0A0A0MS14 117 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 A0A0A6YYC8 382 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-205ENST00000485397 E7ENX8 843 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 I3L1I5 382 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-205ENST00000485397 P2RX6O15547 441 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 PRPF4O43172 522 aaKnown RBP eCLIP18.27■□□□□ 0.521e-13■■□□□ 11.7
COL27A1-205ENST00000485397 PHF2O75151 1096 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 SLC16A8O95907 504 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 F10P00742 488 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 SERPINA7P05543 415 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 HEXBP07686 556 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 PAMP19021 973 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 CXCR5P32302 372 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 SLC26A3P40879 764 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 EFNA3P52797 238 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 SNRPNP63162 240 aaKnown RBP18.27■□□□□ 0.52
COL27A1-205ENST00000485397 TAP2Q03519 686 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 GPS1Q13098 491 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 CUL1Q13616 776 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 GARNL3Q5VVW2 1013 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 ADCK2Q7Z695 626 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 CAND1Q86VP6 1230 aaKnown RBP18.27■□□□□ 0.52
COL27A1-205ENST00000485397 PLD3Q8IV08 490 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 DENND6AQ8IWF6 608 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 BCORP1Q8N888 145 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 FBXO6Q9NRD1 293 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-205ENST00000485397 C14orf105Q9NVL8 296 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 MED16Q9Y2X0 877 aa18.27■□□□□ 0.52
COL27A1-205ENST00000485397 HEATR5BQ9P2D3 2071 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 A0A1W2PQ72 361 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 DYTNA2CJ06 578 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 SMAPO00193 183 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 HAT1O14929 419 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZG16O60844 167 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 JRKO75564 520 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 CCNDBP1O95273 360 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 SYF2O95926 243 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 STATHP02808 62 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ANXA5P08758 320 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 HSD17B2P37059 387 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 TNFSF10P50591 281 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 PER3P56645 1201 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 MAT1AQ00266 395 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 CTBP1Q13363 440 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 DHX34Q14147 1143 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF324BQ6AW86 544 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF470Q6ECI4 717 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF549Q6P9A3 640 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 NEK10Q6ZWH5 1172 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZC3H7AQ8IWR0 971 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 RERGQ96A58 199 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF669Q96BR6 464 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 TAAR6Q96RI8 345 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 TGIF2Q9GZN2 237 aa18.26■□□□□ 0.51
COL27A1-205ENST00000485397 MKKSQ9NPJ1 570 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 INTS10Q9NVR2 710 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 UTP6Q9NYH9 597 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 MRPS2Q9Y399 296 aaKnown RBP18.26■□□□□ 0.51
COL27A1-205ENST00000485397 ZNF839A8K0R7 811 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 GOLGA6L6A8MZA4 724 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 WFS1O76024 890 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 BMP10O95393 424 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 STSP08842 583 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 ITGAMP11215 1152 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
COL27A1-205ENST00000485397 FDXRP22570 491 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 MAGEA6P43360 314 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 KCNK10P57789 538 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 ABATP80404 500 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 SARNPP82979 210 aaKnown RBP18.25■□□□□ 0.51
COL27A1-205ENST00000485397 PCOLCEQ15113 449 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 ZRSR2Q15696 482 aaKnown RBP18.25■□□□□ 0.51
COL27A1-205ENST00000485397 TTLL9Q3SXZ7 439 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 C1QL3Q5VWW1 255 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 CYHR1Q6ZMK1 362 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 FJX1Q86VR8 437 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 LRRC56Q8IYG6 542 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-205ENST00000485397 SHISA5Q8N114 240 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 ASB11Q8WXH4 323 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 HAS2Q92819 552 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 DRC3Q9H069 523 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 HOMER3Q9NSC5 361 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 RIC8BQ9NVN3 520 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 SAMD15Q9P1V8 674 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 VPS9D1Q9Y2B5 631 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 MYO9AB2RTY4 2548 aa18.25■□□□□ 0.51
COL27A1-205ENST00000485397 ITPR2Q14571 2701 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 LOC102723996A0A087X1L8 192 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 TRAV17A0A0B4J275 112 aa18.24■□□□□ 0.51
COL27A1-205ENST00000485397 FAM237BA0A1B0GVD1 139 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms