RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ACPPP15309 386 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 EMP2P54851 167 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 TIAL1Q01085 375 aaKnown RBP eCLIP17.13■□□□□ 0.334e-6■■□□□ 12.4
ATG4B-221ENST00000483778 SRSF11Q05519 484 aaKnown RBP17.13■□□□□ 0.33
ATG4B-221ENST00000483778 MUM1Q2TAK8 710 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 RASGEF1CQ8N431 466 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 TRIM58Q8NG06 486 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 SIGLEC10Q96LC7 697 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 GPR21Q99679 349 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 MACROD1Q9BQ69 325 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 YIPF2Q9BWQ6 316 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 HOMER3Q9NSC5 361 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 INTS10Q9NVR2 710 aaKnown RBP17.13■□□□□ 0.33
ATG4B-221ENST00000483778 TRPC4Q9UBN4 977 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 PPP2R2CQ9Y2T4 447 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 DHRS7Q9Y394 339 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 A0A0A6YYC8 382 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 IDSB3KWA1 339 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 I3L1I5 382 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 HAT1O14929 419 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 CATP04040 527 aaKnown RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 COX6A1P12074 109 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 COILP38432 576 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SLC26A3P40879 764 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SLC1A2P43004 574 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 MPP1Q00013 466 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 MAT1AQ00266 395 aaKnown RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 EEF1A2Q05639 463 aaKnown RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 ZNF169Q14929 603 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 ARHGAP19Q14CB8 494 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 ISLR2Q6UXK2 745 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 MCUQ8NE86 351 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 MMABQ96EY8 250 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SERPINB12Q96P63 405 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 PCYOX1Q9UHG3 505 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SH2B3Q9UQQ2 575 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 SLC5A6Q9Y289 635 aa17.12■□□□□ 0.33
ATG4B-221ENST00000483778 OR2W5A6NFC9 320 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 H7BY64 318 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 SMAPO00193 183 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 JRKO75564 520 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 F10P00742 488 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PRR35P0CG20 571 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 MLNP12872 115 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 MAGEA3P43357 314 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 TSFMP43897 325 aaKnown RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 CARSP49589 748 aaKnown RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 EMP3P54852 163 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 CDC16Q13042 620 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 MFAP5Q13361 173 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 DSG2Q14126 1118 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 NEK10Q6ZWH5 1172 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 MAMDC2Q7Z304 686 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
ATG4B-221ENST00000483778 CPNE9Q8IYJ1 553 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 SIRT6Q8N6T7 355 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 ST6GALNAC3Q8NDV1 305 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 CD200R1Q8TD46 325 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PRAP1Q96NZ9 151 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 LMF1Q96S06 567 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PTGFRNQ9P2B2 879 aa17.11■□□□□ 0.33
ATG4B-221ENST00000483778 PCNX1Q96RV3 2341 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 MAGEB16A2A368 324 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 MAP2K7O14733 419 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 PFDN6O15212 129 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 BANF1O75531 89 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 MPC1LP0DKB6 136 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 PAMP19021 973 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 IMPA1P29218 277 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 DCTP40126 519 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 PGGT1BP53609 377 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 IRAK1BP1Q5VVH5 260 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 B3GNTL1Q67FW5 361 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 MBOAT1Q6ZNC8 495 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 NDUFAF7Q7L592 441 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 ZC3H7AQ8IWR0 971 aaKnown RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 KBTBD2Q8IY47 623 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 NAT8LQ8N9F0 302 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 FBXO15Q8NCQ5 510 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 OR1N1Q8NGS0 311 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 BRIX1Q8TDN6 353 aaKnown RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 COG1Q8WTW3 980 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 FAR1Q8WVX9 515 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 C20orf96Q9NUD7 363 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-221ENST00000483778 ADAMTS6Q9UKP5 1117 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 FBXO5Q9UKT4 447 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 OSGIN2Q9Y236 505 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
ATG4B-221ENST00000483778 CREBBPQ92793 2442 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms