RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SAE1Q9UBE0 346 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ERRFI1Q9UJM3 462 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ARL5AQ9Y689 179 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 AP1M2Q9Y6Q5 423 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 C2CD3Q4AC94 2353 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 SPENQ96T58 3664 aaKnown RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 CREBBPQ92793 2442 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ANKUB1A6NFN9 424 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 WIPF3A6NGB9 483 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 H7C0C1 242 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 BTN3A3O00478 584 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 BTN3A1O00481 513 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SCDO00767 359 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 PSTPIP1O43586 416 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 KRT86O43790 486 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 KDM1AO60341 852 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 OR2B3O76000 313 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ZRANB2O95218 330 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CBX6O95503 412 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 AGTP01019 485 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 HPXP02790 462 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CAPN1P07384 714 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ATP1B2P14415 290 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 COMTP21964 271 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 TACR1P25103 407 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 LSP1P33241 339 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CA5AP35218 305 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 DCTP40126 519 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ATP5OP48047 213 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CD151P48509 253 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 HK2P52789 917 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 DCDP81605 110 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 RPA4Q13156 261 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 PTPRCAPQ14761 206 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 LLGL1Q15334 1064 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CYP2A13Q16696 494 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ASTE1Q2TB18 679 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 PLEKHN1Q494U1 663 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF789Q5FWF6 425 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 DCAF10Q5QP82 559 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 FAM69BQ5VUD6 431 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 IRAK1BP1Q5VVH5 260 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 TLDC1Q6P9B6 456 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 IGFL3Q6UXB1 125 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SNX20Q7Z614 316 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 DAAM2Q86T65 1068 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 CCDC50Q8IVM0 306 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 GALNT16Q8N428 558 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 LILRA3Q8N6C8 439 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 OR52E1Q8NGJ3 308 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 TFGQ92734 400 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 HAUS1Q96CS2 278 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 C19orf60Q96EN9 201 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 PPP1R2P1Q96PQ5 205 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 QKIQ96PU8 341 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 C19orf43Q9BQ61 176 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 HGH1Q9BTY7 390 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 FICDQ9BVA6 458 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 AP1M1Q9BXS5 423 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 GBA3Q9H227 469 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 TFB2MQ9H5Q4 396 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 COG4Q9H9E3 785 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 AGPAT4Q9NRZ5 378 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 TXLNGQ9NUQ3 528 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 C19orf73Q9NVV2 129 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 IFT80Q9P2H3 777 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 AAR2Q9Y312 384 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 PTRH2Q9Y3E5 179 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 HYOU1Q9Y4L1 999 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 COPG1Q9Y678 874 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
CSDE1-207ENST00000483407 SPTBN1Q01082 2364 aaKnown RBP5.66□□□□□ -1.5
CSDE1-207ENST00000483407 ICE1Q9Y2F5 2266 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 FBN2P35556 2912 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 hCG_1818297A0A087WSY0 165 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SYCE3A1L190 88 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 MACROD2A1Z1Q3 448 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 AGAP14A8MT82 685 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 KIAA1324LA8MWY0 1029 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 QSOX1O00391 747 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ZSCAN9O15535 394 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SGTAO43765 313 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PSPNO60542 156 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF189O75820 626 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 KLF7O75840 302 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CLDN1O95832 211 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PVRP15151 417 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CTNNA2P26232 953 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SDHAP31040 664 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 MC4RP32245 332 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SHMT2P34897 504 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 GDNFP39905 211 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 GLRBP48167 497 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PER3P56645 1201 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 XIAPP98170 497 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PRKG2Q13237 762 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms