RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 TRPT1Q86TN4 253 aaKnown RBP3.34□□□□□ -1.87
COPA-204ENST00000481522 PRPF39Q86UA1 669 aaKnown RBP3.34□□□□□ -1.87
COPA-204ENST00000481522 ADIPOR2Q86V24 386 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 FAM114A1Q8IWE2 563 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ZNF843Q8N446 348 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ZNF248Q8NDW4 579 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 OR10S1Q8NGN2 331 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 EXD1Q8NHP7 514 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ZFAND2BQ8WV99 257 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 PTERQ96BW5 349 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 SLC47A1Q96FL8 570 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 DGAT2Q96PD7 388 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 MYADMQ96S97 322 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ABHD1Q96SE0 405 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 RHNO1Q9BSD3 238 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 LMF2Q9BU23 707 aaKnown RBP3.34□□□□□ -1.87
COPA-204ENST00000481522 KLHL4Q9C0H6 718 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ACKR4Q9NPB9 350 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 OSER1Q9NX31 292 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 ADPRHL2Q9NX46 363 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 NME7Q9Y5B8 376 aa3.34□□□□□ -1.87
COPA-204ENST00000481522 MAGED1Q9Y5V3 778 aaPredicted RBP3.34□□□□□ -1.87
COPA-204ENST00000481522 CUBNO60494 3623 aa3.34□□□□□ -1.88
COPA-204ENST00000481522 hCG_1809904A0A1W2PP81 198 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 A0A1W2PPE2 198 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 A0A1W2PR64 198 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 HYKKA2RU49 373 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 SYNDIG1LA6NDD5 238 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 ANKUB1A6NFN9 424 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 TMEM221A6NGB7 291 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 M0R296 226 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 SH2B2O14492 632 aaPredicted RBP3.33□□□□□ -1.88
COPA-204ENST00000481522 LIFP15018 202 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 BDNFP23560 247 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 SLC9A3P48764 834 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 NR0B1P51843 470 aaKnown RBP3.33□□□□□ -1.88
COPA-204ENST00000481522 CDH11P55287 796 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CDH13P55290 713 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 ERVK11-1P61568 191 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CX3CL1P78423 397 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 TOMM20Q15388 145 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CBWD6Q4V339 395 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 MDH1BQ5I0G3 518 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CBWD3Q5JTY5 395 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 MFSD4BQ5TF39 518 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CORO6Q6QEF8 472 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 TMPRSS11FQ6ZWK6 438 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 ZNF554Q86TJ5 538 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 ISCA2Q86U28 154 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 POMGNT2Q8NAT1 580 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 TSPAN14Q8NG11 270 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 RNF128Q8TEB7 428 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 FCAMRQ8WWV6 532 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 SPACA9Q96E40 222 aaPredicted RBP3.33□□□□□ -1.88
COPA-204ENST00000481522 TRAF4Q9BUZ4 470 aaPredicted RBP3.33□□□□□ -1.88
COPA-204ENST00000481522 CCDC106Q9BWC9 280 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 SLC52A3Q9NQ40 469 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 DPP3Q9NY33 737 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 GDE1Q9NZC3 331 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 DDX25Q9UHL0 483 aaKnown RBP3.33□□□□□ -1.88
COPA-204ENST00000481522 MUTYHQ9UIF7 546 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 OSGIN1Q9UJX0 560 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 RABGAP1Q9Y3P9 1069 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 FAM169AQ9Y6X4 670 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 FLT1P17948 1338 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 NAIPQ13075 1403 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 CCDC141Q6ZP82 1450 aa3.33□□□□□ -1.88
COPA-204ENST00000481522 OR2T7P0C7T2 308 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 PATE4P0C8F1 98 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 RNF224P0DH78 156 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 AKR1B1P15121 316 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 DNASE1P24855 282 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 CHRNB4P30926 498 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 SLC6A6P31641 620 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 RAD52P43351 418 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 ZNF75DP51815 510 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 PDX1P52945 283 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 IFI35P80217 286 aaPredicted RBP3.32□□□□□ -1.88
COPA-204ENST00000481522 PPIGQ13427 754 aaKnown RBP eCLIP3.32□□□□□ -1.88
COPA-204ENST00000481522 TAF13Q15543 124 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 N4BP2L1Q5TBK1 243 aaPredicted RBP3.32□□□□□ -1.88
COPA-204ENST00000481522 COMMD2Q86X83 199 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 DNAJC22Q8N4W6 341 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 OR5M8Q8NGP6 311 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 CFAP61Q8NHU2 1237 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 LGALS12Q96DT0 336 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 NSL1Q96IY1 281 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 OLFM1Q99784 485 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 SLF1Q9BQI6 1058 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 RTP3Q9BQQ7 232 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 BTBD10Q9BSF8 475 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 VN1R1Q9GZP7 353 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 TBC1D17Q9HA65 648 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 PELI2Q9HAT8 420 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 EQTNQ9NQ60 294 aa3.32□□□□□ -1.88
COPA-204ENST00000481522 INTS10Q9NVR2 710 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms