RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CHRNGP07510 517 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 FGF4P08620 206 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 C1GALT1C1LP0DN25 315 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CEACAM1P13688 526 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 JUPP14923 745 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ST6GAL1P15907 406 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CD22P20273 847 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SDHBP21912 280 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CXCR2P25025 360 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 GSTM2P28161 218 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SLC1A6P48664 564 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 PDX1P52945 283 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 YBX1P67809 324 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CSNK1G2P78368 415 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 GUCY1A3Q02108 690 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 IRF8Q02556 426 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 TRA2AQ13595 282 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 DOC2AQ14183 400 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 RBBP7Q16576 425 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 XKR6Q5GH73 641 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ARL13AQ5H913 290 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 PAGE2BQ5JRK9 111 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CATSPEREQ5SY80 951 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 LETMD1Q6P1Q0 360 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZNF574Q6ZN55 896 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 RNF165Q6ZSG1 346 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 GPRIN3Q6ZVF9 776 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 RNF44Q7L0R7 432 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 TMPRSS9Q7Z410 1059 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ARHGAP22Q7Z5H3 698 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SYVN1Q86TM6 617 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CUZD1Q86UP6 607 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 TRIM73Q86UV7 250 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 OR4F6Q8NGB9 312 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 KLHL6Q8WZ60 621 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SEC16BQ96JE7 1060 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SLC41A2Q96JW4 573 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 AIF1LQ9BQI0 150 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 SLC29A3Q9BZD2 475 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZNF768Q9H5H4 540 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ACTR8Q9H981 624 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ACSS2Q9NR19 701 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ENAMQ9NRM1 1142 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 ABCF3Q9NUQ8 709 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 GEMIN8Q9NWZ8 242 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 TMEM9Q9P0T7 183 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 RAP2CQ9Y3L5 183 aa12.05□□□□□ -0.48
TRAPPC12-218ENST00000479897 CNOT1A5YKK6 2376 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 IGHV5-10-1A0A0J9YXX1 117 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 TRBC2A0A5B9 178 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 H0YIV9 168 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 H7BY64 318 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PPP6CO00743 305 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CASC3O15234 703 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ITM2AO43736 263 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 LYPLA1O75608 230 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 HSPA4LO95757 839 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 TSPAN8P19075 237 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 SERPINB1P30740 379 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CCKBRP32239 447 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 GRK3P35626 688 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CCR10P46092 362 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 SH3BP2P78314 561 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZNF33BQ06732 778 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZFP36L1Q07352 338 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 SLBPQ14493 270 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CACHD1Q5VU97 1274 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CDCP2Q5VXM1 449 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 FCRL6Q6DN72 434 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 FIGLAQ6QHK4 219 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 RBM44Q6ZP01 1051 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 FAM92BQ6ZTR7 304 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 USP53Q70EK8 1073 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 MILR1Q7Z6M3 343 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 LAS2Q8IYD9 372 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CACTIN-AS1Q8N1I8 211 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 KRT78Q8N1N4 520 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 UBE2E3Q969T4 207 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 TCTN2Q96GX1 697 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PPM1MQ96MI6 270 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PRAP1Q96NZ9 151 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 C20orf27Q9GZN8 174 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 SPNS1Q9H2V7 528 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 MID1IP1Q9NPA3 183 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PILRAQ9UKJ1 303 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 PPT2Q9UMR5 302 aa12.04□□□□□ -0.48
TRAPPC12-218ENST00000479897 IGHV5-51A0A0C4DH38 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms