RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 C1orf105O95561 183 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 METTL18O95568 372 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 TSPAN12O95859 305 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ST13P50502 369 aaKnown RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 TRIM14Q14142 442 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 OR1C1Q15619 314 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 HKDC1Q2TB90 917 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 CCSMST1Q4G0I0 132 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 PLAG1Q6DJT9 500 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 SPINK14Q6IE38 97 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 AFTPHQ6ULP2 937 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 CPEB2Q7Z5Q1 589 aaKnown RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 ZC3H7AQ8IWR0 971 aaKnown RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 GHDCQ8N2G8 530 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 DNAAF3Q8N9W5 541 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 TMEM178AQ8NBL3 297 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 OR13J1Q8NGT2 312 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 OR4L1Q8NH43 312 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 SKA2Q8WVK7 121 aaPredicted RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 SCMH1Q96GD3 660 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 DMRTA2Q96SC8 542 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 CYTH2Q99418 400 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ACAT2Q9BWD1 397 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 OSBPL8Q9BZF1 889 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ABHD10Q9NUJ1 306 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 PPT2Q9UMR5 302 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 NFS1Q9Y697 457 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ABCA2Q9BZC7 2435 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 ADAM10O14672 748 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 PJA2O43164 708 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 FOXS1O43638 330 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 ZNF189O75820 626 aaPredicted RBP16.24■□□□□ 0.19
VIM-204ENST00000478746 BDKRB1P46663 353 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 EFNA3P52797 238 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 FASTKQ14296 549 aaKnown RBP16.24■□□□□ 0.19
VIM-204ENST00000478746 MEP1AQ16819 746 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 FASTKD1Q53R41 847 aaKnown RBP16.24■□□□□ 0.19
VIM-204ENST00000478746 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.24■□□□□ 0.19
VIM-204ENST00000478746 SIAH3Q8IW03 269 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 MMP21Q8N119 569 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.193e-7■■■■■ 36.2
VIM-204ENST00000478746 FAM98AQ8NCA5 519 aaKnown RBP16.24■□□□□ 0.19
VIM-204ENST00000478746 OR6P1Q8NGX9 317 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 MAGEC3Q8TD91 643 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 FRMD6Q96NE9 622 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 TRIM51Q9BSJ1 452 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 DRC3Q9H069 523 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 TNFRSF10DQ9UBN6 386 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 SLC2A6Q9UGQ3 507 aa16.24■□□□□ 0.19
VIM-204ENST00000478746 FOXO6A8MYZ6 492 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 PHF2O75151 1096 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 SP1P08047 785 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 TPM1P09493 284 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 CCNFP41002 786 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 MAT1AQ00266 395 aaKnown RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 HSF1Q00613 529 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 MFSD4BQ5TF39 518 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 PTRHD1Q6GMV3 140 aaKnown RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 GALNTL5Q7Z4T8 443 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 LINC00523Q86TU6 105 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 CRLF3Q8IUI8 442 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 HORMAD2Q8N7B1 307 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 FAM71DQ8N9W8 422 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 OR52K1Q8NGK4 314 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 RERGQ96A58 199 aaPredicted RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 FOPNLQ96NB1 174 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 VN1R1Q9GZP7 353 aa16.23■□□□□ 0.19
VIM-204ENST00000478746 MRPS30Q9NP92 439 aaKnown RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 C19orf25Q9UFG5 118 aaPredicted RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 PRRC2AP48634 2157 aaKnown RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 INTS1Q8N201 2190 aaKnown RBP16.23■□□□□ 0.19
VIM-204ENST00000478746 FAM221AA4D161 298 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 TXNDC9O14530 226 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 SUN1O94901 812 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 TJP3O95049 919 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 GAS8O95995 478 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 MAGEA1P43355 309 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 OC90Q02509 493 aaPredicted RBP16.22■□□□□ 0.19
VIM-204ENST00000478746 FAM53BQ14153 422 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 SEMA3AQ14563 771 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 TSTD2Q5T7W7 516 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 SLC25A25Q6KCM7 469 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 LANCL3Q6ZV70 420 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 CHERPQ8IWX8 916 aaKnown RBP16.22■□□□□ 0.19
VIM-204ENST00000478746 TAB3Q8N5C8 712 aaPredicted RBP16.22■□□□□ 0.19
VIM-204ENST00000478746 OR2A5Q96R48 311 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 SYNPO2LQ9H987 977 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 UTP6Q9NYH9 597 aaKnown RBP16.22■□□□□ 0.19
VIM-204ENST00000478746 SPATA7Q9P0W8 599 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 ANAPC5Q9UJX4 755 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 RUVBL2Q9Y230 463 aaKnown RBP16.22■□□□□ 0.19
VIM-204ENST00000478746 ASB1Q9Y576 335 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 PCDHA3Q9Y5H8 950 aa16.22■□□□□ 0.19
VIM-204ENST00000478746 HEATR5BQ9P2D3 2071 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms