RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PYGBP11216 843 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 C18orf21Q32NC0 220 aaPredicted RBP25.68■■□□□ 1.7
CCM2-211ENST00000478582 FBXO42Q6P3S6 717 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 INO80CQ6PI98 192 aaPredicted RBP25.68■■□□□ 1.7
CCM2-211ENST00000478582 RNF44Q7L0R7 432 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 MCATQ8IVS2 390 aaKnown RBP25.68■■□□□ 1.7
CCM2-211ENST00000478582 IQCKQ8N0W5 287 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 OR1L3Q8NH93 324 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 CUEDC1Q9NWM3 386 aaPredicted RBP25.68■■□□□ 1.7
CCM2-211ENST00000478582 WWOXQ9NZC7 414 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 SLC22A14Q9Y267 594 aa25.68■■□□□ 1.7
CCM2-211ENST00000478582 ANKRD12Q6UB98 2062 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 UBXN8O00124 270 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 GSTA1P08263 222 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 KRT15P19012 456 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 PWWP2BQ6NUJ5 590 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 ABHD11Q8NFV4 315 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 UBTD2Q8WUN7 234 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 N4BP2L2Q92802 583 aaPredicted RBP25.67■■□□□ 1.7
CCM2-211ENST00000478582 EXT2Q93063 718 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 BBC3Q96PG8 261 aaPredicted RBP25.67■■□□□ 1.7
CCM2-211ENST00000478582 MRPL57Q9BQC6 102 aaKnown RBP25.67■■□□□ 1.7
CCM2-211ENST00000478582 WDR70Q9NW82 654 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 SH2B3Q9UQQ2 575 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 KCNE2Q9Y6J6 123 aa25.67■■□□□ 1.7
CCM2-211ENST00000478582 STMND1H3BQB6 276 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 H7BY64 318 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 SRPX2O60687 465 aaPredicted RBP25.66■■□□□ 1.7
CCM2-211ENST00000478582 STK16O75716 305 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 EZRP15311 586 aaKnown RBP25.66■■□□□ 1.7
CCM2-211ENST00000478582 GDF5P43026 501 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 ITGA1P56199 1179 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 DEFB110Q30KQ9 67 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 BEND6Q5SZJ8 279 aaPredicted RBP25.66■■□□□ 1.7
CCM2-211ENST00000478582 TMEM151AQ8N4L1 468 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 ZNF285Q96NJ3 590 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 PRAP1Q96NZ9 151 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 ZFYVE21Q9BQ24 234 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 CD244Q9BZW8 370 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 MRPL46Q9H2W6 279 aaKnown RBP25.66■■□□□ 1.7
CCM2-211ENST00000478582 DCDC2Q9UHG0 476 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 TMCO1Q9UM00 188 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 PCDHB3Q9Y5E6 796 aa25.66■■□□□ 1.7
CCM2-211ENST00000478582 SDK2Q58EX2 2172 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 GOLGA8RI6L899 631 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 EFSO43281 561 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 NRP2O60462 931 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 STK17BO94768 372 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 WDR47O94967 919 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 TIAF1O95411 115 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 DLGAP3O95886 979 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 HSPA7P48741 367 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 ALDH18A1P54886 795 aaKnown RBP25.65■■□□□ 1.7
CCM2-211ENST00000478582 CSNK1G2P78368 415 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 OR4K1Q8NGD4 311 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 SLC5A11Q8WWX8 675 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 NEIL2Q969S2 332 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 SCYL1Q96KG9 808 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 CAPS2Q9BXY5 557 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 XPR1Q9UBH6 696 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 DYRK1BQ9Y463 629 aa25.65■■□□□ 1.7
CCM2-211ENST00000478582 IGSF10Q6WRI0 2623 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 FOXO6A8MYZ6 492 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 E7EQ34 232 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 OR2B3O76000 313 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 CDH1P12830 882 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 ZNF28P17035 718 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 RHDQ02161 417 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 MAP7Q14244 749 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 SETDB1Q15047 1291 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 TCTE1Q5JU00 501 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 GPR135Q8IZ08 494 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 ULBP3Q9BZM4 244 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 DNAJC11Q9NVH1 559 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 GPRC5BQ9NZH0 403 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 TMEM216Q9P0N5 145 aa25.64■■□□□ 1.7
CCM2-211ENST00000478582 A0A0J9YVX5 310 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SCRG1O75711 98 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 KIAA0754O94854 1291 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SBK3P0C264 359 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 GFAPP14136 432 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 CCR8P51685 355 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SLC18A2Q05940 514 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 ZNF844Q08AG5 666 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 PFKFB4Q16877 469 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 MANEAQ5SRI9 462 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 METTL2BQ6P1Q9 378 aaKnown RBP25.63■■□□□ 1.69
CCM2-211ENST00000478582 TLDC1Q6P9B6 456 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 LRRC70Q7Z2Q7 622 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 ADCK2Q7Z695 626 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 TMEM126BQ8IUX1 230 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 LSM14AQ8ND56 463 aaKnown RBP25.63■■□□□ 1.69
CCM2-211ENST00000478582 MYRIPQ8NFW9 859 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 ESAMQ96AP7 390 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 OR2A5Q96R48 311 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SELENOSQ9BQE4 189 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SARGQ9BW04 601 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 SPRTNQ9H040 489 aaPredicted RBP25.63■■□□□ 1.69
CCM2-211ENST00000478582 PELI2Q9HAT8 420 aa25.63■■□□□ 1.69
CCM2-211ENST00000478582 AP1M2Q9Y6Q5 423 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms