RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 STAT5AP42229 794 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GDF5P43026 501 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GABRA4P48169 554 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 HNMTP50135 292 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TMPRSS3P57727 454 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ABATP80404 500 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CDKL1Q00532 357 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GPS2Q13227 327 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SLC9A5Q14940 896 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 COL28A1Q2UY09 1125 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 LGSNQ5TDP6 509 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ARHGAP40Q5TG30 622 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 WDR93Q6P2C0 686 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 FAM199XQ6PEV8 388 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ADGRD1Q6QNK2 874 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 LCTLQ6UWM7 567 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 RNF44Q7L0R7 432 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 THOC6Q86W42 341 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PAQR7Q86WK9 346 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 OR4N4Q8N0Y3 316 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 METTL27Q8N6F8 245 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 OR2W6PQ8NHA6 318 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 STAG3L4Q8TBR4 150 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 AENQ8WTP8 325 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 MR1Q95460 341 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 RERGQ96A58 199 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ESAMQ96AP7 390 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 KIAA1143Q96AT1 154 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 RHBDF1Q96CC6 855 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 OR4K3Q96R72 315 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TMEM79Q9BSE2 394 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 HAUS8Q9BT25 410 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 DHRS4Q9BTZ2 278 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SGPP1Q9BX95 441 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PARD6BQ9BYG5 372 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CHRNA10Q9GZZ6 450 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GPN2Q9H9Y4 310 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TXLNGQ9NUQ3 528 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ANKMY1Q9P2S6 941 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 DHCR7Q9UBM7 475 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CROTQ9UKG9 612 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SNX7Q9UNH6 387 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SLC22A14Q9Y267 594 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 DYRK1BQ9Y463 629 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 KLK4Q9Y5K2 254 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 MRPS18BQ9Y676 258 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SCN2AQ99250 2005 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 IQANK1A0A1B0GTG1 560 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SYCE1LA8MT33 242 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 H0YGG7 62 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 H3BMH7 237 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GOLGA8RI6L899 631 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CCNT2O60583 730 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 KATNA1O75449 491 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 MT-ND3P03897 115 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 GFAPP14136 432 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 NPPBP16860 134 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TCN2P20062 427 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ALAS2P22557 587 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 DLSTP36957 453 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SLC26A3P40879 764 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 MAGEA12P43365 314 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 KCNC1P48547 511 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 HSPA7P48741 367 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CSRP3P50461 194 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ARF3P61204 181 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ABHD18Q0P651 414 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TCTE1Q5JU00 501 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 WASHC2DQ5SRD0 308 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CATSPEREQ5SY80 951 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ZNF425Q6IV72 752 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TLDC1Q6P9B6 456 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 EMBQ6PCB8 327 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TTLL10Q6ZVT0 673 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CCDC91Q7Z6B0 441 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TMPRSS11BQ86T26 416 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ISCA2Q86U28 154 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PLD6Q8N2A8 252 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 TTC29Q8NA56 475 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PDPRQ8NCN5 879 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CT55Q8WUE5 264 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SLC5A11Q8WWX8 675 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SLC39A7Q92504 469 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 ISL2Q96A47 359 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 MTBPQ96DY7 904 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 NDC1Q9BTX1 674 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SPRY4Q9C004 299 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SYNPO2LQ9H987 977 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CNOT10Q9H9A5 744 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 AKIRIN1Q9H9L7 192 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 LHX9Q9NQ69 397 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms