RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IDSB3KWA1 339 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 AVILO75366 819 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 SERPINA7P05543 415 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 EDN3P14138 238 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 CCND1P24385 295 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 FAM53BQ14153 422 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 CCDC137Q6PK04 289 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 SUN3Q8TAQ9 357 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 METTL21AQ8WXB1 218 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 ASB11Q8WXH4 323 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 SERPINB12Q96P63 405 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 PKP4Q99569 1192 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 TGIF2Q9GZN2 237 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 CCDC177Q9NQR7 707 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 RUVBL1Q9Y265 456 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 RELNP78509 3460 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 TNRC6AQ8NDV7 1962 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 TRAV17A0A0B4J275 112 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 A0A1W2PQ72 361 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 TCRBV7S3A2A0A539 114 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 A1L4Q6 167 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 E7ENX8 843 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 KIF5CO60282 957 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ALOX12BO75342 701 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 WFS1O76024 890 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 BMP10O95393 424 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 TTC4O95801 387 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 LDLRP01130 860 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 GRK3P35626 688 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 SLC1A2P43004 574 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 FNTAP49354 379 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 RPS15AP62244 130 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 TAP2Q03519 686 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 SP140Q13342 867 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ATG9BQ674R7 924 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ZNF425Q6IV72 752 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 RPUSD3Q6P087 351 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 FBXO42Q6P3S6 717 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 LINC00696Q6ZRV3 163 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 UBE2R2Q712K3 238 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 RASGEF1CQ8N431 466 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ZNF480Q8WV37 535 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 FAR1Q8WVX9 515 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 OR2A5Q96R48 311 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ZBTB20Q9HC78 741 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 FBXO6Q9NRD1 293 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 ERRFI1Q9UJM3 462 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 DHRS7Q9Y394 339 aa13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 MRPS2Q9Y399 296 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-209ENST00000478349 H0YIG0 161 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 GOLGA8MH3BSY2 632 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 MASP2O00187 686 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 C8GP07360 202 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 PRR35P0CG20 571 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 COX6A1P12074 109 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 PGAM1P18669 254 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 COILP38432 576 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 SLC26A3P40879 764 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 SKP1P63208 163 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 CTBP1Q13363 440 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 CUL1Q13616 776 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 VWA2Q5GFL6 755 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 DENND6AQ8IWF6 608 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 MYO1HQ8N1T3 1032 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 TBC1D19Q8N5T2 526 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 GRHL3Q8TE85 626 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 GPR21Q99679 349 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 TUBB6Q9BUF5 446 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 ABCF3Q9NUQ8 709 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 OLAHQ9NV23 265 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 TMEM184CQ9NVA4 438 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 TAS2R13Q9NYV9 303 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 FBXO5Q9UKT4 447 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 MED13Q9UHV7 2174 aa13.73□□□□□ -0.21
SMARCE1-209ENST00000478349 IGHV1-45A0A0A0MS14 117 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 IGKV1-8A0A0C4DH67 115 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 ZCWPW2A0A1B0GU75 182 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 GFYI3L273 518 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 NRP2O60462 931 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 HIST1H2AGP0C0S8 130 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 C8orf89P0DMQ9 161 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 HIST1H2ADP20671 130 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 HKDC1Q2TB90 917 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 TTC27Q6P3X3 843 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 PCGF5Q86SE9 256 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms