RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 C7orf57Q8NEG2 295 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 PRSS33Q8NF86 280 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 OR52B6Q8NGF0 335 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 HMGB4Q8WW32 186 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 TESCQ96BS2 214 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 MTERF3Q96E29 417 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 SPDL1Q96EA4 605 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 C12orf66Q96MD2 445 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 DPY30Q9C005 99 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 ROGDIQ9GZN7 287 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 KCNH6Q9H252 994 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 VCXQ9H320 206 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 CARS2Q9HA77 564 aaKnown RBP7.55□□□□□ -1.2
RBM39-230ENST00000476806 WDR41Q9HAD4 459 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 FBRSL1Q9HCM7 1045 aaKnown RBP7.55□□□□□ -1.2
RBM39-230ENST00000476806 SIRT5Q9NXA8 310 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 CCDC167Q9P0B6 97 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 SUCOQ9UBS9 1254 aaKnown RBP7.55□□□□□ -1.2
RBM39-230ENST00000476806 CROTQ9UKG9 612 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 HCN2Q9UL51 889 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 ST14Q9Y5Y6 855 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 VPS13AQ96RL7 3174 aa7.55□□□□□ -1.2
RBM39-230ENST00000476806 NUMA1Q14980 2115 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 A0A1W2PPC4 97 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ARHGAP10A1A4S6 786 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ANKDD1BA6NHY2 528 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TMEM233B4DJY2 109 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 E7ENX8 843 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 SLC31A1O15431 190 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 PEX11AO75192 247 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 SEC22BO75396 215 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 EEDO75530 441 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 KCNH1O95259 989 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 ACP5P13686 325 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 IL9P15248 144 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 ME2P23368 584 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 PTX3P26022 381 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 CD27P26842 260 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 CMPK1P30085 196 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 MAP2K3P46734 347 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 PREPP48147 710 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 POLR2JP52435 117 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 METAP1P53582 386 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 MTTPP55157 894 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 RPL38P63173 70 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 TXNL4AP83876 142 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 TAP2Q03519 686 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 RELAQ04206 551 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.22e-9■■■□□ 17.2
RBM39-230ENST00000476806 NFE2L1Q14494 772 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 UBXN2BQ14CS0 331 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ELOCQ15369 112 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TEAD4Q15561 434 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TMEM35AQ53FP2 167 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 USP39Q53GS9 565 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 WDR45BQ5MNZ6 344 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ANXA8L1Q5VT79 327 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ENPP7Q6UWV6 458 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 LINC00114Q6XXX2 140 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 CHST15Q7LFX5 561 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TMPRSS11BQ86T26 416 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 OOSP2Q86WS3 158 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 LAS2Q8IYD9 372 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ULK2Q8IYT8 1036 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 DEFB107AQ8IZN7 70 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 DSELQ8IZU8 1212 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TMEM132CQ8N3T6 1108 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 FBXW8Q8N3Y1 598 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TRIML2Q8N7C3 387 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TMEM145Q8NBT3 493 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 CATSPER1Q8NEC5 780 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 TRPV3Q8NET8 790 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 OR2L8Q8NGY9 312 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 ZNF480Q8WV37 535 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 EZH1Q92800 747 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 ASB9Q96DX5 294 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 LRGUKQ96M69 825 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 PKP4Q99569 1192 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 THTPAQ9BU02 230 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 SPATA9Q9BWV2 254 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 EPB41L1Q9H4G0 881 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 RAD21L1Q9H4I0 556 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 LMAN1LQ9HAT1 526 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 C8orf4Q9NR00 106 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 FAM120CQ9NX05 1096 aaKnown RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 WSB2Q9NYS7 404 aaPredicted RBP7.54□□□□□ -1.2
RBM39-230ENST00000476806 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
RBM39-230ENST00000476806 SUSD2Q9UGT4 822 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms