RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TAP2Q03519 686 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CBLBQ13191 982 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 DCAF10Q5QP82 559 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 YOD1Q5VVQ6 348 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-205ENST00000476387 JMJD6Q6NYC1 403 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-205ENST00000476387 TTLL10Q6ZVT0 673 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 RNF44Q7L0R7 432 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ADCK2Q7Z695 626 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CLEC1AQ8NC01 280 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ZNF592Q92610 1267 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CDKL2Q92772 493 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 PNPLA2Q96AD5 504 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CCDC138Q96M89 665 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ZNF285Q96NJ3 590 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 ZFYVE21Q9BQ24 234 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 PARVBQ9HBI1 364 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CCDC177Q9NQR7 707 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-205ENST00000476387 MOCS1Q9NZB8 636 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 TXNDC16Q9P2K2 825 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 VWA7Q9Y334 891 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 PSAT1Q9Y617 370 aa15.48■□□□□ 0.07
COL1A1-205ENST00000476387 CNOT3O75175 753 aaKnown RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ALBP02768 609 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ALPPP05187 535 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 HIST1H2AGP0C0S8 130 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PIM1P11309 404 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 HIST1H2ADP20671 130 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 SAT1P21673 171 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PLTPP55058 493 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 TBPL1P62380 186 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ABATP80404 500 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PRDX1Q06830 199 aaKnown RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ILF2Q12905 390 aaKnown RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 SLC9A5Q14940 896 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 WHAMMP3Q1A5X7 153 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 FAM214AQ32MH5 1076 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 SLC6A19Q695T7 634 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ZC3HC1Q86WB0 502 aaKnown RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 CCDC25Q86WR0 208 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 RBMXL3Q8N7X1 1067 aaKnown RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PCSK5Q92824 1860 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 HIST1H2AHQ96KK5 128 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 OLFM1Q99784 485 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 HIST1H2AJQ99878 128 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PLCD4Q9BRC7 762 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 H2AFJQ9BTM1 129 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PHACTR1Q9C0D0 580 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 WDR54Q9H977 334 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 SLC22A11Q9NSA0 550 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 CUTCQ9NTM9 273 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 P4HTMQ9NXG6 502 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 STOX2Q9P2F5 926 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-205ENST00000476387 ADAMTS6Q9UKP5 1117 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 PDE10AQ9Y233 779 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 SHANK1Q9Y566 2161 aa15.47■□□□□ 0.07
COL1A1-205ENST00000476387 FAM95CA0A1B0GW59 222 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 FITM1A5D6W6 292 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 DSCR3O14972 297 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 NRP2O60462 931 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 EIF2S1P05198 315 aaKnown RBP15.46■□□□□ 0.07
COL1A1-205ENST00000476387 UMODP07911 640 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 EZRP15311 586 aaKnown RBP15.46■□□□□ 0.07
COL1A1-205ENST00000476387 SSTR1P30872 391 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 SOX8P57073 446 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 YBX1P67809 324 aaKnown RBP15.46■□□□□ 0.07
COL1A1-205ENST00000476387 MYBPC3Q14896 1274 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 INPP5JQ15735 1006 aaPredicted RBP15.46■□□□□ 0.07
COL1A1-205ENST00000476387 WASHC2DQ5SRD0 308 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 PRAMEF13Q5VWM6 474 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 FRMPD2BQ6IN97 320 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 PPP1R32Q7Z5V6 425 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 GALNT16Q8N428 558 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 Q8NA96 180 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 FBXO25Q8TCJ0 367 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 VPS39Q96JC1 886 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 TRIM54Q9BYV2 358 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 PCBD2Q9H0N5 130 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 SLC26A1Q9H2B4 701 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 RHOJQ9H4E5 214 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 SLAMF7Q9NQ25 335 aa15.46■□□□□ 0.07
COL1A1-205ENST00000476387 ESPL1Q14674 2120 aa15.46■□□□□ 0.06
COL1A1-205ENST00000476387 KIF2AO00139 706 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-205ENST00000476387 IPO13O94829 963 aaKnown RBP15.45■□□□□ 0.06
COL1A1-205ENST00000476387 TSPAN12O95859 305 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 GSTA2P09210 222 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 GP1BBP13224 206 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 ZNF37AP17032 561 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-205ENST00000476387 ITGAXP20702 1163 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 GNLYP22749 145 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 MMP11P24347 488 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 CCND1P24385 295 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 UQCRFS1P47985 274 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 SLC12A2P55011 1212 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 AP1S2P56377 157 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 ZNF425Q6IV72 752 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 AGTRAPQ6RW13 159 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 IGFL3Q6UXB1 125 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 MBOAT1Q6ZNC8 495 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 OVCH1Q7RTY7 1134 aa15.45■□□□□ 0.06
COL1A1-205ENST00000476387 PAQR7Q86WK9 346 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms