RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MFAP5Q13361 173 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 DSG2Q14126 1118 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF169Q14929 603 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ARHGAP19Q14CB8 494 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TLR1Q15399 786 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 RBBP7Q16576 425 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CYP1B1Q16678 543 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MUM1Q2TAK8 710 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TUBB8Q3ZCM7 444 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ICE2Q659A1 982 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 B3GNTL1Q67FW5 361 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF324BQ6AW86 544 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF787Q6DD87 383 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF470Q6ECI4 717 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CASC4Q6P4E1 433 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ISLR2Q6UXK2 745 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 LINC00696Q6ZRV3 163 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 NEK10Q6ZWH5 1172 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 NDUFAF7Q7L592 441 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 PRSS41Q7RTY9 318 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 PIWIL4Q7Z3Z4 852 aaKnown RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 VN1R4Q7Z5H5 301 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 IGDCC3Q8IVU1 814 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CSNK1A1LQ8N752 337 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 NAT8LQ8N9F0 302 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ST6GALNAC3Q8NDV1 305 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MCUQ8NE86 351 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CD200R1Q8TD46 325 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MAGEC3Q8TD91 643 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 GRHL3Q8TE85 626 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 FAR1Q8WVX9 515 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TM9SF4Q92544 642 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 KCNJ9Q92806 393 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MAGOHBQ96A72 148 aaKnown RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF669Q96BR6 464 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CABS1Q96KC9 395 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 IMMP1LQ96LU5 166 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CCDC138Q96M89 665 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 PRAP1Q96NZ9 151 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 LMF1Q96S06 567 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 GPR21Q99679 349 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CRB3Q9BUF7 120 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TGIF2Q9GZN2 237 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 HOMER3Q9NSC5 361 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 INTS10Q9NVR2 710 aaKnown RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 KLHL42Q9P2K6 505 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TRPC4Q9UBN4 977 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ADAMTS6Q9UKP5 1117 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SH2B3Q9UQQ2 575 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SLC5A6Q9Y289 635 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 DHRS7Q9Y394 339 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MRFAP1Q9Y605 127 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ICE1Q9Y2F5 2266 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 LRBAP50851 2863 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 IGHV1-45A0A0A0MS14 117 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 IGHV3-20A0A0C4DH32 117 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CTAGE9A4FU28 777 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 E5RI56 91 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 SMAPO00193 183 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 SNPHO15079 494 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 LRRTM2O43300 516 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 LCMT2O60294 686 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 KLHL41O60662 606 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 DNAJB6O75190 326 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 BANF1O75531 89 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 BMP10O95393 424 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 F10P00742 488 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 SERPINA7P05543 415 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 EZRP15311 586 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 FBLP22087 321 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 RPA3P35244 121 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 DCTP40126 519 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CARSP49589 748 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 EMP2P54851 167 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 EEF1A2Q05639 463 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CDC16Q13042 620 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 TSTA3Q13630 321 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 PHKG1Q16816 387 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 MSS51Q4VC12 460 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 HSP90AA5PQ58FG0 334 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 ARMC3Q5W041 872 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 FAAH2Q6GMR7 532 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CCDC137Q6PK04 289 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 TMEM205Q6UW68 189 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 MBOAT1Q6ZNC8 495 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 MAMDC2Q7Z304 686 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 ZC3H7AQ8IWR0 971 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CPNE9Q8IYJ1 553 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 RAB42Q8N4Z0 105 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 OR9A4Q8NGU2 314 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 BRIX1Q8TDN6 353 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 EEF1AKMT1Q8WVE0 214 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 MAIP1Q8WWC4 291 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 TM4SF19Q96DZ7 209 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 MMABQ96EY8 250 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 CNDP1Q96KN2 507 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 NDNQ99608 321 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 SLX1AQ9BQ83 275 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms