RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LIN52Q52LA3 116 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 FAM98BQ52LJ0 330 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 PYCR3Q53H96 274 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 PAGE2BQ5JRK9 111 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 RNF220Q5VTB9 566 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 ACSM2BQ68CK6 577 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 OR4F3Q6IEY1 312 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 NXPE4Q6UWF7 544 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 DNAJC14Q6Y2X3 702 aaPredicted RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 ZNF551Q7Z340 670 aaPredicted RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 TRMT11Q7Z4G4 463 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 TMPRSS11BQ86T26 416 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 SERPINA11Q86U17 422 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 LRRTM4Q86VH4 590 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 DCUN1D3Q8IWE4 304 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 C10orf111Q8N326 155 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 CBR4Q8N4T8 237 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 TP53I13Q8NBR0 393 aaPredicted RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 HUS1BQ8NHY5 278 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 EZH1Q92800 747 aaPredicted RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 RAD51AP1Q96B01 352 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 COQ8BQ96D53 544 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 CNBD2Q96M20 576 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 MENTQ9BUN1 341 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 BDH2Q9BUT1 245 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 THUMPD3Q9BV44 507 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 EBPLQ9BY08 206 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 UGT2B28Q9BY64 529 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 MRPS26Q9BYN8 205 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 CARS2Q9HA77 564 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 NTN4Q9HB63 628 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 DMRT3Q9NQL9 472 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 CCDC177Q9NQR7 707 aaPredicted RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 DCAF13Q9NV06 445 aaKnown RBP9.47□□□□□ -0.89
USP39-214ENST00000474572 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 ATP6V1HQ9UI12 483 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 BTNL2Q9UIR0 455 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 MSRAQ9UJ68 235 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 OAZ3Q9UMX2 235 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 SH2B3Q9UQQ2 575 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 INVSQ9Y283 1065 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
USP39-214ENST00000474572 PIPSLA2A3N6 862 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 FAM149AA5PLN7 773 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 TRIM64A6NGJ6 449 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 IGLON5A6NGN9 336 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 RFXANKO14593 260 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 KMOO15229 486 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 TPST1O60507 370 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 DEAF1O75398 565 aaPredicted RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 CREG1O75629 220 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 MYO1DO94832 1006 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 HPRP00739 348 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 TFAP2AP05549 437 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 GPX2P18283 190 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 MYF6P23409 242 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 GDI1P31150 447 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PIK3CBP42338 1070 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 RPS13P62277 151 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 PLIN5Q00G26 463 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CHRNB3Q05901 458 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 LRRC74AQ0VAA2 488 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 MERTKQ12866 999 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 ADAM15Q13444 863 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PDE7AQ13946 482 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SLBPQ14493 270 aaKnown RBP eCLIP9.46□□□□□ -0.9
USP39-214ENST00000474572 PON2Q15165 354 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 NKG7Q16617 165 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PRAMEF14Q5SWL7 426 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CATSPEREQ5SY80 951 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PRAMEF13Q5VWM6 474 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 METRNLQ641Q3 311 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CPZQ66K79 652 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 ZNF776Q68DI1 518 aaPredicted RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 ADNP2Q6IQ32 1131 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CRTC3Q6UUV7 619 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PARM1Q6UWI2 310 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 AMZ2Q86W34 360 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 FAM129CQ86XR2 697 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SYTL1Q8IYJ3 562 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 METTL4Q8N3J2 472 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 ST13P5Q8NFI4 369 aaPredicted RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 GOT1L1Q8NHS2 421 aaPredicted RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 SLC5A11Q8WWX8 675 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 FGF14Q92915 247 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 UBE2E3Q969T4 207 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 TBC1D20Q96BZ9 403 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 MTERF1Q99551 399 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 GABRG3Q99928 467 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CENPKQ9BS16 269 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 ADI1Q9BV57 179 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SPATA9Q9BWV2 254 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 PIF1Q9H611 641 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms