RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 CHRAC1Q9NRG0 131 aa12.55□□□□□ -0.4
GAPDH-208ENST00000474249 TREX1Q9NSU2 369 aa12.55□□□□□ -0.4
GAPDH-208ENST00000474249 SPATA7Q9P0W8 599 aa12.55□□□□□ -0.4
GAPDH-208ENST00000474249 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
GAPDH-208ENST00000474249 TCAF1Q9Y4C2 921 aa12.55□□□□□ -0.4
GAPDH-208ENST00000474249 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 PHF2O75151 1096 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CLDN14O95500 239 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CCNFP41002 786 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 RBPJQ06330 500 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 PRDX1Q06830 199 aaKnown RBP12.54□□□□□ -0.4
GAPDH-208ENST00000474249 FAM53BQ14153 422 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
GAPDH-208ENST00000474249 FASTKD1Q53R41 847 aaKnown RBP12.54□□□□□ -0.4
GAPDH-208ENST00000474249 ZNF766Q5HY98 468 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CTSL3PQ5NE16 218 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 PLAG1Q6DJT9 500 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 TTC23LQ6PF05 361 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 NEK10Q6ZWH5 1172 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 DNAAF3Q8N9W5 541 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 MMABQ96EY8 250 aaPredicted RBP12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CABS1Q96KC9 395 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 SIGLEC12Q96PQ1 595 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 CYTH2Q99418 400 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 TRIM51Q9BSJ1 452 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 VN1R1Q9GZP7 353 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 SH3BGRL2Q9UJC5 107 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
GAPDH-208ENST00000474249 VPS13CQ709C8 3753 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 A0A0A6YYC8 382 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 I3L1I5 382 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 MYO1CO00159 1063 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 KPNA5O15131 536 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 P2RX6O15547 441 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.46e-7■■□□□ 12.4
GAPDH-208ENST00000474249 MAN1A2O60476 641 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 CYC1P08574 325 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 ARNTP27540 789 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 CMPK1P30085 196 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 CD96P40200 585 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 TTPAP49638 278 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 SMSP52788 366 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 AP2B1P63010 937 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 ZNF33BQ06732 778 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 TUBA3CQ13748 450 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 ACER2Q5QJU3 275 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 TUBA3EQ6PEY2 450 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 SUSD1Q6UWL2 747 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 NCCRP1Q6ZVX7 275 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 FGD2Q7Z6J4 655 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 LRRC6Q86X45 466 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 LRRC56Q8IYG6 542 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-208ENST00000474249 BEST3Q8N1M1 668 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 MRFAP1L1Q96HT8 127 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 PANX3Q96QZ0 392 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 DMRTA2Q96SC8 542 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 ACAT2Q9BWD1 397 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 MCCC2Q9HCC0 563 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 CATSPERZQ9NTU4 200 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 GALPQ9UBC7 116 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 MKL2Q9ULH7 1088 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 MRFAP1Q9Y605 127 aa12.53□□□□□ -0.4
GAPDH-208ENST00000474249 IGHV3-20A0A0C4DH32 117 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 ARHGEF33A8MVX0 844 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 PSIP1O75475 530 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 C8orf89P0DMQ9 161 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 MYBL2P10244 700 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 IGFBP2P18065 325 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 ATP5DP30049 168 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 CETN2P41208 172 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 PRAMEP78395 509 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 TMED2Q15363 201 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 PTRHD1Q6GMV3 140 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 CPEB2Q7Z5Q1 589 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 PCGF5Q86SE9 256 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 MPP5Q8N3R9 675 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 SUN3Q8TAQ9 357 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 MAGEC3Q8TD91 643 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 PHF10Q8WUB8 498 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 SMPDL3AQ92484 453 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 POM121Q96HA1 1249 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 DRC3Q9H069 523 aa12.52□□□□□ -0.41
GAPDH-208ENST00000474249 MRPS30Q9NP92 439 aaKnown RBP12.52□□□□□ -0.41
GAPDH-208ENST00000474249 TEKT2Q9UIF3 430 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms