RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ETS1P14921 441 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 AGAP20933 346 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 CRADDP78560 199 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 CTSL3PQ5NE16 218 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 ACER2Q5QJU3 275 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF468Q5VIY5 522 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 MTFR2Q6P444 385 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 CRLF3Q8IUI8 442 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 OR9A4Q8NGU2 314 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 SLC35B2Q8TB61 432 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 SKA2Q8WVK7 121 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 C14orf79Q96F83 325 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 FRMD6Q96NE9 622 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 TRIM51Q9BSJ1 452 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 ENKD1Q9H0I2 346 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 MCCC2Q9HCC0 563 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 CHRAC1Q9NRG0 131 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 REXO2Q9Y3B8 237 aaKnown RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.59e-12■□□□□ 10.1
TRAF4-209ENST00000473421 ARHGEF33A8MVX0 844 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 TJP3O95049 919 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 RPN2P04844 631 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 HOXB4P17483 251 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 SMSP52788 366 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 RWDD2BP57060 319 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 RBPJQ06330 500 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 KLF1Q13351 362 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 BTBD16Q32M84 506 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 FASTKD1Q53R41 847 aaKnown RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 MEX3BQ6ZN04 569 aaKnown RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 THAP3Q8WTV1 239 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 SCMH1Q96GD3 660 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 PPP1R2P1Q96PQ5 205 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 DMRTA2Q96SC8 542 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 CYTH2Q99418 400 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 SPOCK3Q9BQ16 436 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 FERMT1Q9BQL6 677 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 ANP32EQ9BTT0 268 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 LACRTQ9GZZ8 138 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 MKKSQ9NPJ1 570 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-209ENST00000473421 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
TRAF4-209ENST00000473421 GRID2IPA4D2P6 1211 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 SOWAHDA6NJG2 315 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 AKR1B15C9JRZ8 316 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 PRMT5O14744 637 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 HAT1O14929 419 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ASNA1O43681 348 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 DNAJB6O75190 326 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 NIPSNAP2O75323 286 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 FKBP9O95302 570 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 MATN4O95460 622 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 C8orf89P0DMQ9 161 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ERGP11308 486 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ADRA1DP25100 572 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ARNTP27540 789 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 EMP3P54852 163 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 GBX1Q14549 363 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 OR1C1Q15619 314 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ACSBG2Q5FVE4 666 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 PTRHD1Q6GMV3 140 aaKnown RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 GALNTL5Q7Z4T8 443 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 CPEB2Q7Z5Q1 589 aaKnown RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF227Q86WZ6 799 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 BIRC8Q96P09 236 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 TUBB6Q9BUF5 446 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 RAB11FIP5Q9BXF6 653 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-209ENST00000473421 ABCF3Q9NUQ8 709 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 C14orf105Q9NVL8 296 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 TAC3Q9UHF0 121 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 PCYOX1Q9UHG3 505 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 CDC14AQ9UNH5 594 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 HCFC1P51610 2035 aa11.91□□□□□ -0.5
TRAF4-209ENST00000473421 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-209ENST00000473421 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms