RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 PCYOX1Q9UHG3 505 aa18.8■□□□□ 0.6
COL9A3-210ENST00000472880 MAGEB16A2A368 324 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 SDR42E2A6NKP2 422 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 TXNDC9O14530 226 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 FFAR3O14843 346 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 GPR42O15529 346 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 NRDCO43847 1150 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 CLDN1O95832 211 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 F7P08709 466 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-210ENST00000472880 MPC1LP0DKB6 136 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 COX6A1P12074 109 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 ENO3P13929 434 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-210ENST00000472880 FDXRP22570 491 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 ABATP80404 500 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 EEF1A2Q05639 463 aaKnown RBP18.79■□□□□ 0.6
COL9A3-210ENST00000472880 THEMIS2Q5TEJ8 643 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 TTC27Q6P3X3 843 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 FAM180AQ6UWF9 173 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 NDUFAF7Q7L592 441 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 DENND6AQ8IWF6 608 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 FBXO15Q8NCQ5 510 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-210ENST00000472880 ZNF480Q8WV37 535 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 OR2A5Q96R48 311 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 DRC3Q9H069 523 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 SYNPO2LQ9H987 977 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 MKKSQ9NPJ1 570 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-210ENST00000472880 KLHL42Q9P2K6 505 aa18.79■□□□□ 0.6
COL9A3-210ENST00000472880 UNC79Q9P2D8 2635 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 DYTNA2CJ06 578 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 E7ENX8 843 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 GOLGA8MH3BSY2 632 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 E2F3O00716 465 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 PCDH17O14917 1159 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 KIF5CO60282 957 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 KLHL18O94889 574 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 HEXBP07686 556 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 EDN3P14138 238 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 SLC1A2P43004 574 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 ARG2P78540 354 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 TAP2Q03519 686 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 CTBP1Q13363 440 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 FAAH2Q6GMR7 532 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 LAPTM4BQ86VI4 370 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 AMER3Q8N944 861 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 MCUQ8NE86 351 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 FAR1Q8WVX9 515 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 MAGOHBQ96A72 148 aaKnown RBP18.78■□□□□ 0.6
COL9A3-210ENST00000472880 SERPINB12Q96P63 405 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 EBNA1BP2Q99848 306 aaKnown RBP18.78■□□□□ 0.6
COL9A3-210ENST00000472880 RIC8BQ9NVN3 520 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 PTGFRNQ9P2B2 879 aa18.78■□□□□ 0.6
COL9A3-210ENST00000472880 DOPEY1Q5JWR5 2465 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 A0A0A6YYC8 382 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-210ENST00000472880 I3L1I5 382 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-210ENST00000472880 HAT1O14929 419 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 ZBTB14O43829 449 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 PRR35P0CG20 571 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 COL8A1P27658 744 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 SLC26A3P40879 764 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 RELAQ04206 551 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 NDUFA9Q16795 377 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 LURAP1LQ8IV03 231 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 LMNTD2Q8IXW0 634 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 CALML6Q8TD86 181 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 BRIX1Q8TDN6 353 aaKnown RBP18.77■□□□□ 0.6
COL9A3-210ENST00000472880 ASB11Q8WXH4 323 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 GPR21Q99679 349 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 C20orf96Q9NUD7 363 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-210ENST00000472880 MED16Q9Y2X0 877 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 MAD1L1Q9Y6D9 718 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 COMMD10Q9Y6G5 202 aa18.77■□□□□ 0.6
COL9A3-210ENST00000472880 IGHV1-45A0A0A0MS14 117 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 ZCWPW2A0A1B0GU75 182 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 A0A1W2PQ72 361 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 P2RX6O15547 441 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 SERPINA7P05543 415 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 PER3P56645 1201 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 LONRF1Q17RB8 773 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 ZNF787Q6DD87 383 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 ZNF549Q6P9A3 640 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 UBE2R2Q712K3 238 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-210ENST00000472880 PLD3Q8IV08 490 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 SIRT6Q8N6T7 355 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 BCORP1Q8N888 145 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 CATSPER1Q8NEC5 780 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 OR1N1Q8NGS0 311 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 CD200R1Q8TD46 325 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 MAGEB10Q96LZ2 347 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-210ENST00000472880 TGIF2Q9GZN2 237 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 OSGIN2Q9Y236 505 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 PPP2R2CQ9Y2T4 447 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 DHRS7Q9Y394 339 aa18.76■□□□□ 0.59
COL9A3-210ENST00000472880 NBPF19A0A087WUL8 3843 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 GFYI3L273 518 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 FOXS1O43638 330 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 WFS1O76024 890 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 BMP10O95393 424 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 IMPA1P29218 277 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 SOX11P35716 441 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 COILP38432 576 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms