RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 HMGCLP35914 325 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SPAM1P38567 509 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 NR2C2P49116 596 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MAN2A2P49641 1150 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 GZMKP49863 264 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 VAV2P52735 878 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MLLT10P55197 1068 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 GFERP55789 205 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MAXP61244 160 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 AP2B1P63010 937 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 IFI35P80217 286 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 OGDHQ02218 1023 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SLC25A11Q02978 314 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 DUSP2Q05923 314 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PPIDQ08752 370 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 KLF1Q13351 362 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 XRCC4Q13426 336 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 GPR18Q14330 331 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 KRT33BQ14525 404 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PAFAH1B3Q15102 231 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 IGFBP7Q16270 282 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CA9Q16790 459 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 RAB6CQ53S08 254 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 FCRL6Q6DN72 434 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MTFR2Q6P444 385 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ABRAXAS1Q6UWZ7 409 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 RBM43Q6ZSC3 357 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 ZNF572Q7Z3I7 529 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 TRIM74Q86UV6 250 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 NT5DC3Q86UY8 548 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SFTPA2Q8IWL1 248 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PELI3Q8N2H9 469 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PGBD5Q8N414 524 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 KCTD6Q8NC69 237 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CCNYQ8ND76 341 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 DDHD1Q8NEL9 900 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 C1orf162Q8NEQ5 155 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 GDAP1Q8TB36 358 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 FAM71BQ8TC56 605 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PROKR1Q8TCW9 393 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CTNNBL1Q8WYA6 563 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 N4BP2L2Q92802 583 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 MR1Q95460 341 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.4□□□□□ -1.87
XRN1-209ENST00000472625 ULK4Q96C45 1275 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PEBP4Q96S96 227 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 AGAP2Q99490 1192 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 VAT1Q99536 393 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 BPIFA3Q9BQP9 254 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CCM2Q9BSQ5 444 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 TBC1D10AQ9BXI6 508 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 FSD1LQ9BXM9 530 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MAK16Q9BXY0 300 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 NLNQ9BYT8 704 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ILKAPQ9H0C8 392 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 RAB6CQ9H0N0 254 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ING2Q9H160 280 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ISCUQ9H1K1 167 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SLC25A51Q9H1U9 297 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 HAUS4Q9H6D7 363 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 APMAPQ9HDC9 416 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SLC40A1Q9NP59 571 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 FGF21Q9NSA1 209 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SMOXQ9NWM0 555 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PARPBPQ9NWS1 579 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SOHLH2Q9NX45 425 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 AIPL1Q9NZN9 384 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ATXN10Q9UBB4 475 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SLC23A1Q9UHI7 598 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 TLK1Q9UKI8 766 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CHKBQ9Y259 395 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 BTRCQ9Y297 605 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 PKP3Q9Y446 797 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ZNF711Q9Y462 761 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.4□□□□□ -1.87
XRN1-209ENST00000472625 AP1M2Q9Y6Q5 423 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 LRP4O75096 1905 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 RP1P56715 2156 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SPTBN1Q01082 2364 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 GLYATL1P3A0A0U1RQE8 302 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 FAM170AA1A519 330 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ARGFXA6NJG6 315 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SLC9B1P1A6NJY1 282 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 OR52A4PA6NMU1 304 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 C2orf81A6NN90 581 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MARCH11A6NNE9 402 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 E7EQ34 232 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 APOL1O14791 398 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 HNRNPRO43390 633 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 CEACAM4O75871 244 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 PROSCO94903 275 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 NDST3O95803 873 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SERPINC1P01008 464 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 EPOP01588 193 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SLC4A1P02730 911 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 AMY1AP04745 511 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms