RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ABHD18Q0P651 414 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 CLN3Q13286 438 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 GRM7Q14831 915 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 ST3GAL2Q16842 350 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 TECRLQ5HYJ1 363 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 LRRC70Q7Z2Q7 622 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 IL22RA1Q8N6P7 574 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 TTC29Q8NA56 475 aaPredicted RBP14.48□□□□□ -0.09
SNX13-205ENST00000471744 UBTD2Q8WUN7 234 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 SLC5A11Q8WWX8 675 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 EXT2Q93063 718 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 NKD1Q969G9 470 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 RERGQ96A58 199 aaPredicted RBP14.48□□□□□ -0.09
SNX13-205ENST00000471744 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 PRAP1Q96NZ9 151 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 DPH2Q9BQC3 489 aaPredicted RBP14.48□□□□□ -0.09
SNX13-205ENST00000471744 MRPL57Q9BQC6 102 aaKnown RBP14.48□□□□□ -0.09
SNX13-205ENST00000471744 FAM117AQ9C073 453 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 PELI2Q9HAT8 420 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 PCMTD2Q9NV79 361 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 DNAJC11Q9NVH1 559 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
SNX13-205ENST00000471744 PADI1Q9ULC6 663 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 SLC22A14Q9Y267 594 aa14.48□□□□□ -0.09
SNX13-205ENST00000471744 KCNE1BA0A087WTH5 132 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 CCDC151A5D8V7 595 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 H3BMH7 237 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 UBXN8O00124 270 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 MAP2K7O14733 419 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 KLK10O43240 276 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 ZNF749O43361 778 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 CDH1P12830 882 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 GFAPP14136 432 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 ZNF28P17035 718 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 KRT15P19012 456 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 GNAZP19086 355 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 KCNC1P48547 511 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 EMP3P54852 163 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 ALDH18A1P54886 795 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 YBX1P67809 324 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 CSNK1G2P78368 415 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 CDC16Q13042 620 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 FAM214AQ32MH5 1076 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 MANEAQ5SRI9 462 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 METTL2BQ6P1Q9 378 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 FBXO42Q6P3S6 717 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 SPACA3Q8IXA5 215 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 PLD6Q8N2A8 252 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 ZNF655Q8N720 491 aaPredicted RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 GALNT6Q8NCL4 622 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 PROKR1Q8TCW9 393 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 EPS8L3Q8TE67 593 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 MZB1Q8WU39 189 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 NEIL2Q969S2 332 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 KIAA1143Q96AT1 154 aaPredicted RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 CLIP3Q96DZ5 547 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 NAF1Q96HR8 494 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 OR4K3Q96R72 315 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 TMEM79Q9BSE2 394 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 NDC1Q9BTX1 674 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 SARGQ9BW04 601 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 NLNQ9BYT8 704 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 CD244Q9BZW8 370 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 DCDC2Q9UHG0 476 aa14.47□□□□□ -0.09
SNX13-205ENST00000471744 TNPO3Q9Y5L0 923 aaKnown RBP14.47□□□□□ -0.09
SNX13-205ENST00000471744 FITM1A5D6W6 292 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 SMIM23A6NLE4 172 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 SRRM3A6NNA2 597 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 HAT1O14929 419 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 CLGNO14967 610 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 TAPBPO15533 448 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 HCRTR1O43613 425 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 KLK8O60259 260 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 SMIM24O75264 130 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 NTRK1P04629 796 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 MTHFD2P13995 350 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 CXCR2P25025 360 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 HSPA7P48741 367 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 VSX2P58304 361 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 NAA30Q147X3 362 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 SETDB1Q15047 1291 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 PDK4Q16654 411 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 WASHC2DQ5SRD0 308 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 RHBDD2Q6NTF9 364 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 TIPARPQ7Z3E1 657 aaKnown RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 CROCCP2Q86T23 111 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 OR4K1Q8NGD4 311 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 OR2A5Q96R48 311 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 CCNL2Q96S94 520 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 C17orf62Q9BQA9 187 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 AIF1LQ9BQI0 150 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 TMEM109Q9BVC6 243 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 PITHD1Q9GZP4 211 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 SPRTNQ9H040 489 aaPredicted RBP14.46□□□□□ -0.09
SNX13-205ENST00000471744 EHD1Q9H4M9 534 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 LHX9Q9NQ69 397 aa14.46□□□□□ -0.09
SNX13-205ENST00000471744 TXLNGQ9NUQ3 528 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms