RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 CAPN12Q6ZSI9 719 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 SYT9Q86SS6 491 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 LRRC6Q86X45 466 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 FAM20CQ8IXL6 584 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 PRSS58Q8IYP2 241 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 UBL4BQ8N7F7 174 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 FAM71DQ8N9W8 422 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 LMNTD1Q8N9Z9 388 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 CATSPER1Q8NEC5 780 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 OR6P1Q8NGX9 317 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 OR4L1Q8NH43 312 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 HMGCLL1Q8TB92 370 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 BRIX1Q8TDN6 353 aaKnown RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 ITLN2Q8WWU7 325 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 CABS1Q96KC9 395 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 IL17FQ96PD4 163 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 FAM118BQ9BPY3 351 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 ZFYVE21Q9BQ24 234 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 MENTQ9BUN1 341 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 SPATA7Q9P0W8 599 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 SEC14L3Q9UDX4 400 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 GNPTGQ9UJJ9 305 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 KLK4Q9Y5K2 254 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 MAU2Q9Y6X3 613 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 APCP25054 2843 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 A0A0J9YVX5 310 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ZNF839A8K0R7 811 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CCL21O00585 134 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 TXNDC9O14530 226 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 PRMT5O14744 637 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 PFDN6O15212 129 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 OR1I1O60431 355 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 GPC4O75487 556 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 KLHL18O94889 574 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 SLCO2B1O94956 709 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 UNC5CO95185 931 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CCNDBP1O95273 360 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 METTL18O95568 372 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 EIF2S1P05198 315 aaKnown RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 HEXBP07686 556 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CYC1P08574 325 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ESRRAP11474 423 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 COX6A1P12074 109 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 AGAP20933 346 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ADRA1DP25100 572 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 SSTR2P30874 369 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CA7P43166 264 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 Q0VFX4 171 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ZNF630Q2M218 657 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CCDC38Q502W7 563 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 TSTD2Q5T7W7 516 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ABHD17BQ5VST6 288 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 GARNL3Q5VVW2 1013 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ATG9BQ674R7 924 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 XKRXQ6PP77 449 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 RNF44Q7L0R7 432 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 OTOAQ7RTW8 1153 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 TXLNBQ8N3L3 684 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 MPP5Q8N3R9 675 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 PPHLN1Q8NEY8 458 aaKnown RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 OR2L3Q8NG85 312 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 OR13J1Q8NGT2 312 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 HDAC10Q969S8 669 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 RERGQ96A58 199 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 C8orf44Q96CB5 159 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CCDC120Q96HB5 630 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 MAGED4Q96JG8 741 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 LURAP1Q96LR2 239 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 MIPEPQ99797 713 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 YIPF2Q9BWQ6 316 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 MKKSQ9NPJ1 570 aaPredicted RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 CATSPERZQ9NTU4 200 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 TRPC4Q9UBN4 977 aa8.68□□□□□ -1.02
CPSF4-211ENST00000471455 ZC3H7BQ9UGR2 993 aaKnown RBP8.68□□□□□ -1.02
CPSF4-211ENST00000471455 IGHV1-45A0A0A0MS14 117 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 OR5H15A6NDH6 313 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 MIF4GDA9UHW6 222 aaKnown RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 IDSB3KWA1 339 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 PRAMEF2O60811 474 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 CTSVO60911 334 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 PKMP14618 531 aaKnown RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 AOAHP28039 575 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 ATP5DP30049 168 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 STIP1P31948 543 aaKnown RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 HSD17B2P37059 387 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 FDFT1P37268 417 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 ACVR1Q04771 509 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 EEF1A2Q05639 463 aaKnown RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 GRB7Q14451 532 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 HIBCHQ6NVY1 386 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-211ENST00000471455 VRK3Q8IV63 474 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 SYCE1Q8N0S2 351 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 EID3Q8N140 333 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 SIRT6Q8N6T7 355 aa8.67□□□□□ -1.02
CPSF4-211ENST00000471455 CSNK1A1LQ8N752 337 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms