RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PTPN7P35236 360 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 CD151P48509 253 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 RAB28P51157 221 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 FOXL2P58012 376 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 COPS2P61201 443 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 FOLH1Q04609 750 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 OCA2Q04671 838 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 PDK2Q15119 407 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 DEFB110Q30KQ9 67 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 BCL7AQ4VC05 210 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 LRRC38Q5VT99 294 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 MFSD7Q6UXD7 560 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAM151BQ6UXP7 276 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 Q6ZPB1 254 aaPredicted RBP8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 NDUFAF7Q7L592 441 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPPL2CQ8IUH8 684 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 RELL1Q8IUW5 271 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ADGRF3Q8IZF5 1079 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 OR52E1Q8NGJ3 308 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 HM13Q8TCT9 377 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF398Q8TD17 642 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 THAP3Q8WTV1 239 aaPredicted RBP8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 NINJ1Q92982 152 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 MAGEB18Q96M61 343 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF160Q9HCG1 818 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAM60AQ9NP50 221 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ABCF3Q9NUQ8 709 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 FGFR1OP2Q9NVK5 253 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 TNFRSF10DQ9UBN6 386 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 TBK1Q9UHD2 729 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 TINAGQ9UJW2 476 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 SLC12A4Q9UP95 1085 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF148Q9UQR1 794 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF835Q9Y2P0 537 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 ARL2BPQ9Y2Y0 163 aa8.52□□□□□ -1.05
SYNGAP1-205ENST00000470232 hCG_1818297A0A087WSY0 165 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 NSG1A0A0A6YYJ2 146 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 A0A0J9YY10 115 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 LRRD1A4D1F6 860 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 POC1B-GALNT4F8VUJ3 575 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 KCNK1O00180 336 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 AURKAO14965 403 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 DSCR3O14972 297 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 TP73O15350 636 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 BMP10O95393 424 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRAMEF1O95521 474 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SERPINA7P05543 415 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRR35P0CG20 571 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ICAM2P13598 275 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 NQO1P15559 274 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 UGT2B7P16662 529 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CXCR2P25025 360 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 DNAJA1P31689 397 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SHMT2P34897 504 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SOX11P35716 441 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 NSG1P42857 185 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 GABRA4P48169 554 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ARSEP51690 589 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 IST1P53990 364 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 NCALDP61601 193 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ELF3P78545 371 aaPredicted RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CACNG1Q06432 222 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PPIDQ08752 370 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 AP1B1Q10567 949 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 GPS1Q13098 491 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 DPYSL3Q14195 570 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PCOLCEQ15113 449 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZKSCAN8Q15776 578 aaPredicted RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAM214AQ32MH5 1076 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ATP13A4Q4VNC1 1196 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 DRICH1Q6PGQ1 229 aaPredicted RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 RIPOR1Q6ZS17 1223 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRUNE1Q86TP1 453 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 TMEM200AQ86VY9 491 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 DNAJC22Q8N4W6 341 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CNTD1Q8N815 330 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 NIPA2Q8N8Q9 360 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 TTC29Q8NA56 475 aaPredicted RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ACBD4Q8NC06 268 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PHC3Q8NDX5 983 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 BRIX1Q8TDN6 353 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PHF10Q8WUB8 498 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 HEXDCQ8WVB3 486 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 HAUS1Q96CS2 278 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPSB2Q99619 263 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 PAIP2Q9BPZ3 127 aaKnown RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 TREX2Q9BQ50 279 aaPredicted RBP8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF559Q9BR84 538 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF670Q9BS34 389 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CRB3Q9BUF7 120 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 RNF32Q9H0A6 362 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 CXXC4Q9H2H0 198 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 VPS37BQ9H9H4 285 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SLC22A11Q9NSA0 550 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 SMOXQ9NWM0 555 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 EURLQ9NYK6 297 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms