RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 C19orf25Q9UFG5 118 aaPredicted RBP11.31□□□□□ -0.6
LSM2-209ENST00000470083 CIDEBQ9UHD4 219 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 RSPH14Q9UHP6 348 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
LSM2-209ENST00000470083 H7C0S8 307 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 CDC40O60508 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
LSM2-209ENST00000470083 PRMT3O60678 531 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 PRSS56P0CW18 603 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 TFEBP19484 476 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 ADRA1AP35348 466 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 PEX19P40855 299 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 GEMP55040 296 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 SYT16Q17RD7 645 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 CMPK2Q5EBM0 449 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 FIGNQ5HY92 759 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 EMC4Q5J8M3 183 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 GARNL3Q5VVW2 1013 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 CHSY3Q70JA7 882 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 PIANPQ8IYJ0 282 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 SLC22A15Q8IZD6 547 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 OR2L3Q8NG85 312 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 OR5M3Q8NGP4 307 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 M1APQ8TC57 530 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 DNAJC1Q96KC8 554 aaKnown RBP11.3□□□□□ -0.6
LSM2-209ENST00000470083 CYTH2Q99418 400 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 MIPEPQ99797 713 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 SARGQ9BW04 601 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 RAB11FIP5Q9BXF6 653 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 NEUROD4Q9HD90 331 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 CRIM1Q9NZV1 1036 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
LSM2-209ENST00000470083 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 ADAM21Q9UKJ8 722 aa11.3□□□□□ -0.6
LSM2-209ENST00000470083 RUVBL1Q9Y265 456 aaKnown RBP11.3□□□□□ -0.6
LSM2-209ENST00000470083 ZANQ9Y493 2812 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 OR2A25A4D2G3 310 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 H0YGG7 62 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 FOXS1O43638 330 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 ANXA9O76027 345 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 PSMB5P28074 263 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 TAS2R50P59544 299 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
LSM2-209ENST00000470083 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 MYL5Q02045 173 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 ITIH4Q14624 930 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 ZNF468Q5VIY5 522 aaPredicted RBP11.29□□□□□ -0.6
LSM2-209ENST00000470083 SHEQ5VZ18 495 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 PACS1Q6VY07 963 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 MICALCLQ6ZW33 695 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 PAQR7Q86WK9 346 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 ARHGEF39Q8N4T4 335 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 CSNK1A1LQ8N752 337 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 GORASP1Q9BQQ3 440 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 DRC3Q9H069 523 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 TRIM45Q9H8W5 580 aaPredicted RBP11.29□□□□□ -0.6
LSM2-209ENST00000470083 DMRT3Q9NQL9 472 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 SLC39A10Q9ULF5 831 aa11.29□□□□□ -0.6
LSM2-209ENST00000470083 A0A0A6YYC8 382 aaPredicted RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 I3L1I5 382 aaPredicted RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 HS6ST1O60243 411 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 PHF2O75151 1096 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 VPS26AO75436 327 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 PECAM1P16284 738 aaPredicted RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 CYB561P49447 251 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 AGTR2P50052 363 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 MAT1AQ00266 395 aaKnown RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 MINDY4Q4G0A6 757 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 FBXO42Q6P3S6 717 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 LRRC8BQ6P9F7 803 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 ZNF227Q86WZ6 799 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 OR10Q1Q8NGQ4 319 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 C16orf52Q8NHV5 167 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 GBA3Q9H227 469 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 HSD3B7Q9H2F3 369 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
LSM2-209ENST00000470083 KLF13Q9Y2Y9 288 aaPredicted RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
LSM2-209ENST00000470083 A0A087X0T9 212 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 NDC80O14777 642 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 KRT1P04264 644 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 OR56A5P0C7T3 313 aa11.27□□□□□ -0.61
LSM2-209ENST00000470083 FAM228BP0C875 321 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms