RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 KCNJ9Q92806 393 aa16.64■□□□□ 0.25
COL7A1-208ENST00000470076 RERGQ96A58 199 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-208ENST00000470076 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-208ENST00000470076 C8orf44Q96CB5 159 aa16.64■□□□□ 0.25
COL7A1-208ENST00000470076 OR2A5Q96R48 311 aa16.64■□□□□ 0.25
COL7A1-208ENST00000470076 MESP1Q9BRJ9 268 aa16.64■□□□□ 0.25
COL7A1-208ENST00000470076 CCDC68Q9H2F9 335 aa16.64■□□□□ 0.25
COL7A1-208ENST00000470076 XAB2Q9HCS7 855 aaKnown RBP16.64■□□□□ 0.25
COL7A1-208ENST00000470076 A0A1W2PQ72 361 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 SDR42E2A6NKP2 422 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 IDSB3KWA1 339 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 E7ENX8 843 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 KLHL18O94889 574 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 CLDN1O95832 211 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 MPC1LP0DKB6 136 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 ENO3P13929 434 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 EDN3P14138 238 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 SLC26A3P40879 764 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 EMP2P54851 167 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 TAP2Q03519 686 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 HKDC1Q2TB90 917 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 ANKRD22Q5VYY1 191 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 RPUSD3Q6P087 351 aaKnown RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 LAPTM4BQ86VI4 370 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 LMNTD2Q8IXW0 634 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 MCUQ8NE86 351 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 ASB11Q8WXH4 323 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 MMABQ96EY8 250 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 YIPF2Q9BWQ6 316 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 TGIF2Q9GZN2 237 aa16.63■□□□□ 0.25
COL7A1-208ENST00000470076 MKKSQ9NPJ1 570 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-208ENST00000470076 SMAPO00193 183 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 E2F3O00716 465 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 ZBTB14O43829 449 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 SERPINA7P05543 415 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 ANXA5P08758 320 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 PRR35P0CG20 571 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 COX6A1P12074 109 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 CTBP1Q13363 440 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 FAM180AQ6UWF9 173 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 DENND6AQ8IWF6 608 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 AMER3Q8N944 861 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 PPFIBP2Q8ND30 876 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 GIMAP7Q8NHV1 300 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 SLC30A3Q99726 388 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
COL7A1-208ENST00000470076 DRC3Q9H069 523 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 SYNPO2LQ9H987 977 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 RIC8BQ9NVN3 520 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 PCYOX1Q9UHG3 505 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 MED16Q9Y2X0 877 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 DHRS7Q9Y394 339 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
COL7A1-208ENST00000470076 IGHV1-45A0A0A0MS14 117 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 ZCWPW2A0A1B0GU75 182 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 DYTNA2CJ06 578 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 GFYI3L273 518 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 SYF2O95926 243 aaKnown RBP16.61■□□□□ 0.25
COL7A1-208ENST00000470076 HEXBP07686 556 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 SOX11P35716 441 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 SKIV2L2P42285 1042 aaKnown RBP16.61■□□□□ 0.25
COL7A1-208ENST00000470076 ARG2P78540 354 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 CUL1Q13616 776 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 FAM53BQ14153 422 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 THEMIS2Q5TEJ8 643 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 TTC27Q6P3X3 843 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 ZNF549Q6P9A3 640 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 RIPOR1Q6ZS17 1223 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 ADCK2Q7Z695 626 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 LRRC8AQ8IWT6 810 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 RASGEF1CQ8N431 466 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 ARHGEF39Q8N4T4 335 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 CALML6Q8TD86 181 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 PSMF1Q92530 271 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 MAGOHBQ96A72 148 aaKnown RBP16.61■□□□□ 0.25
COL7A1-208ENST00000470076 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
COL7A1-208ENST00000470076 FBXO6Q9NRD1 293 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-208ENST00000470076 A0A0A6YYC8 382 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 I3L1I5 382 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 EIF3FO00303 357 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 FFAR3O14843 346 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 GPR42O15529 346 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 FOXS1O43638 330 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 KIF5CO60282 957 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 BMP10O95393 424 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 HRH2P25021 359 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 COL8A1P27658 744 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 SLC1A2P43004 574 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 MAGEA3P43357 314 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 PER3P56645 1201 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 AP2B1P63010 937 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 EEF1A2Q05639 463 aaKnown RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 NDUFA9Q16795 377 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 LONRF1Q17RB8 773 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 CYHR1Q6ZMK1 362 aa16.6■□□□□ 0.25
COL7A1-208ENST00000470076 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-208ENST00000470076 BCORP1Q8N888 145 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms