RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TRPC4Q9UBN4 977 aa23.29■■□□□ 1.32
PTCH1-210ENST00000468211 VPS9D1Q9Y2B5 631 aa23.29■■□□□ 1.32
PTCH1-210ENST00000468211 DIDO1Q9BTC0 2240 aaKnown RBP23.29■■□□□ 1.32
PTCH1-210ENST00000468211 ITPR2Q14571 2701 aa23.29■■□□□ 1.32
PTCH1-210ENST00000468211 CRYBG3Q68DQ2 2970 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 SCN3AQ9NY46 2000 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 MAP2K7O14733 419 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 P2RX6O15547 441 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 FOXS1O43638 330 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 VPS26AO75436 327 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 SYF2O95926 243 aaKnown RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 COX6A1P12074 109 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 COILP38432 576 aaPredicted RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 MAGEA3P43357 314 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 EFNA3P52797 238 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 THOC5Q13769 683 aaKnown RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 DSG2Q14126 1118 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 ZNF169Q14929 603 aaPredicted RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 ISLR2Q6UXK2 745 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 FBXO15Q8NCQ5 510 aaPredicted RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 GRHL3Q8TE85 626 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 PSMF1Q92530 271 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 GPR21Q99679 349 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 XAB2Q9HCS7 855 aaKnown RBP23.28■■□□□ 1.32
PTCH1-210ENST00000468211 PCYOX1Q9UHG3 505 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 DHRS7Q9Y394 339 aa23.28■■□□□ 1.32
PTCH1-210ENST00000468211 CROCCQ5TZA2 2017 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 MAGEB16A2A368 324 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 IDSB3KWA1 339 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 GFYI3L273 518 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SMAPO00193 183 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 E2F3O00716 465 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 HAT1O14929 419 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 PHF2O75151 1096 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 STATHP02808 62 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 MPC1LP0DKB6 136 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 HSD17B2P37059 387 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SLC26A3P40879 764 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 TSFMP43897 325 aaKnown RBP23.27■■□□□ 1.32
PTCH1-210ENST00000468211 MPP1Q00013 466 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 CYP1B1Q16678 543 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SYT16Q17RD7 645 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 TTLL9Q3SXZ7 439 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 PIWIL4Q7Z3Z4 852 aaKnown RBP23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SHISA5Q8N114 240 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 CD200R1Q8TD46 325 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 KCNJ9Q92806 393 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SIGLEC10Q96LC7 697 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 YIPF2Q9BWQ6 316 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 EPS8L2Q9H6S3 715 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 KLHL42Q9P2K6 505 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 CDC14AQ9UNH5 594 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 SLC5A6Q9Y289 635 aa23.27■■□□□ 1.32
PTCH1-210ENST00000468211 MRPS2Q9Y399 296 aaKnown RBP23.27■■□□□ 1.32
PTCH1-210ENST00000468211 CELSR2Q9HCU4 2923 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 A0A0A6YYC8 382 aaPredicted RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 I3L1I5 382 aaPredicted RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 HAUS5O94927 633 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 CELA2AP08217 269 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 EMP2P54851 167 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 EEF1A2Q05639 463 aaKnown RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 CDC16Q13042 620 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 MFAP5Q13361 173 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 FAAH2Q6GMR7 532 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 CCDC137Q6PK04 289 aaKnown RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 CPNE9Q8IYJ1 553 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 NAT8LQ8N9F0 302 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 ST6GALNAC3Q8NDV1 305 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 MVB12AQ96EY5 273 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 MMABQ96EY8 250 aaPredicted RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 VPS50Q96JG6 964 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 AGPAT4Q9NRZ5 378 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 C20orf96Q9NUD7 363 aaPredicted RBP23.26■■□□□ 1.31
PTCH1-210ENST00000468211 MAD1L1Q9Y6D9 718 aa23.26■■□□□ 1.31
PTCH1-210ENST00000468211 CCNDBP1O95273 360 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 EZRP15311 586 aaKnown RBP23.25■■□□□ 1.31
PTCH1-210ENST00000468211 IMPA1P29218 277 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 SKIV2L2P42285 1042 aaKnown RBP23.25■■□□□ 1.31
PTCH1-210ENST00000468211 MAT1AQ00266 395 aaKnown RBP23.25■■□□□ 1.31
PTCH1-210ENST00000468211 ELOAQ14241 798 aaKnown RBP23.25■■□□□ 1.31
PTCH1-210ENST00000468211 NDUFAF7Q7L592 441 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 MAMDC2Q7Z304 686 aaPredicted RBP23.25■■□□□ 1.31
PTCH1-210ENST00000468211 LURAP1LQ8IV03 231 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 KBTBD2Q8IY47 623 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 C5orf34Q96MH7 638 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 LMF1Q96S06 567 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 CCDC68Q9H2F9 335 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 FBXO5Q9UKT4 447 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 SCN2AQ99250 2005 aa23.25■■□□□ 1.31
PTCH1-210ENST00000468211 IGHV1-45A0A0A0MS14 117 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 NSG1A0A0A6YYJ2 146 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 A0A1W2PQ72 361 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ZNF839A8K0R7 811 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 H7BY64 318 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 PRR35P0CG20 571 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 SOX11P35716 441 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 ABATP80404 500 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 TIAL1Q01085 375 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTCH1-210ENST00000468211 RELAQ04206 551 aa23.24■■□□□ 1.31
PTCH1-210ENST00000468211 TLR1Q15399 786 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms