RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KIR3DL1P43629 444 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 SLC11A2P49281 568 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 WNT3P56703 355 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CSNK2BP67870 215 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 MTAPQ13126 283 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 NFATC2Q13469 925 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 DUOXA1Q1HG43 343 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 AMER2Q8N7J2 671 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 APOLD1Q96LR9 279 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 MOV10Q9HCE1 1003 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 LATS2Q9NRM7 1088 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 PCDHGA3Q9Y5H0 932 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 LOC100506127A0A0U1RQW1 187 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 KMOO15229 486 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 TLL1O43897 1013 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 IGHA2P01877 340 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 DNTTP04053 509 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CDK1P06493 297 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 ASGR1P07306 291 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 COL6A1P12109 1028 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CTGFP29279 349 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CRISP3P54108 245 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 MRPL58Q14197 206 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 NDUFA5Q16718 116 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 METTL2BQ6P1Q9 378 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 MMAAQ8IVH4 418 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 TP53INP1Q96A56 240 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 PANX1Q96RD7 426 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 NEK6Q9HC98 313 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 IL26Q9NPH9 171 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 DNMT3LQ9UJW3 386 aa12.59□□□□□ -0.39
PDZRN3-205ENST00000466780 MN1Q10571 1320 aaPredicted RBP12.58□□□□□ -0.39
PDZRN3-205ENST00000466780 A6NL46 340 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 YY2O15391 372 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 NUDT7P0C024 238 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PRPH2P23942 346 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 GGT2P36268 569 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 TRPC1P48995 793 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 NUDT6P53370 316 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 KCNJ10P78508 379 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 UGT8Q16880 541 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 CLECL1Q8IZS7 167 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RNF175Q8N4F7 328 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 IL17RDQ8NFM7 739 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF675Q8TD23 568 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PIH1D2Q8WWB5 315 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 CMTM7Q96FZ5 175 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 Q96MT0 163 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 EMILIN2Q9BXX0 1053 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 SLC32A1Q9H598 525 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ELOVL6Q9H5J4 265 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 FCF1Q9Y324 198 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PCDHGB6Q9Y5F9 930 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 CLCA1A8K7I4 914 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 TMEM229AB2RXF0 380 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RGS13O14921 159 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PRAMEF4O60810 478 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PTHP01270 115 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 STSP08842 583 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 AMD1P17707 334 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ACRV1P26436 265 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ATP5C1P36542 298 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 DUSP4Q13115 394 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 PRAMEF9Q5VWM5 478 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 MSANTD1Q6ZTZ1 278 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 EPYCQ99645 322 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RETREG1Q9H6L5 497 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 RAD18Q9NS91 495 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
PDZRN3-205ENST00000466780 TRBV5-4A0A0C4DH59 114 aa12.57□□□□□ -0.4
PDZRN3-205ENST00000466780 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
PDZRN3-205ENST00000466780 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
PDZRN3-205ENST00000466780 SYN3O14994 580 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms