RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 ZNF501Q96CX3 271 aaPredicted RBP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 FBXO17Q96EF6 278 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 SENP5Q96HI0 755 aaPredicted RBP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 RSRC1Q96IZ7 334 aaKnown RBP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 FUCA2Q9BTY2 467 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 TRAF4Q9BUZ4 470 aaPredicted RBP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 GLT8D2Q9H1C3 349 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 OSGEPL1Q9H4B0 414 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 ZBTB20Q9HC78 741 aaPredicted RBP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 SH3GLB2Q9NR46 395 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 OSER1Q9NX31 292 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 RPS6KA6Q9UK32 745 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 TMEM5Q9Y2B1 443 aa3.84□□□□□ -1.79
EDEM3-205ENST00000466606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.84□□□□□ -1.79
EDEM3-205ENST00000466606 COL1A1P02452 1464 aaPredicted RBP3.84□□□□□ -1.8
EDEM3-205ENST00000466606 MAP1BP46821 2468 aaKnown RBP3.84□□□□□ -1.8
EDEM3-205ENST00000466606 ZNF462Q96JM2 2506 aa3.84□□□□□ -1.8
EDEM3-205ENST00000466606 PTPN13Q12923 2485 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 A0A0U1RQG5 324 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 OR6C76A6NM76 312 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FAM72CH0Y354 149 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 SSX4O60224 188 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 LDLRP01130 860 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 H1F0P07305 194 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 MT3P25713 68 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 U2AF2P26368 475 aaKnown RBP eCLIP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 RFC4P35249 363 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 STAT2P52630 851 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 CDH11P55287 796 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 SPAG1Q07617 926 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 PRKG2Q13237 762 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 MFAP5Q13361 173 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 GRAPQ13588 217 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 STK38Q15208 465 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 ZC2HC1CQ53FD0 456 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FAM72AQ5TYM5 149 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FAM72DQ6L9T8 149 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FIGLAQ6QHK4 219 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 RBMS3Q6XE24 437 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 STOX1Q6ZVD7 989 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 TRPT1Q86TN4 253 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FAM72BQ86X60 149 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 DZIP1Q86YF9 867 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 GPC2Q8N158 579 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 DNAJC22Q8N4W6 341 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 APPL2Q8NEU8 664 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 GRAPLQ8TC17 118 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 CD99L2Q8TCZ2 262 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 TAS1R2Q8TE23 839 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 PIBF1Q8WXW3 757 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 ZNF622Q969S3 477 aaKnown RBP eCLIP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 HES6Q96HZ4 224 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 OR6C1Q96RD1 312 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 FNDC11Q9BVV2 318 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 SPATC1LQ9H0A9 340 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 TMX4Q9H1E5 349 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 CCDC68Q9H2F9 335 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 CUEDC2Q9H467 287 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 TBC1D17Q9HA65 648 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 DDX43Q9NXZ2 648 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 GAB2Q9UQC2 676 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 MYH1P12882 1939 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 ANKRD17O75179 2603 aaKnown RBP3.83□□□□□ -1.8
EDEM3-205ENST00000466606 USP24Q9UPU5 2620 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 DNAH12Q6ZR08 3092 aa3.83□□□□□ -1.8
EDEM3-205ENST00000466606 ZFYVE26Q68DK2 2539 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 DICER1Q9UPY3 1922 aaKnown RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ANKRD31Q8N7Z5 1873 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 SNED1Q8TER0 1413 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ASTN2O75129 1339 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 NEDD4P46934 1319 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 LOC102723996A0A087X1L8 192 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ELOVL7A1L3X0 281 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 IFIT3O14879 490 aaKnown RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 XRCC3O43542 346 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 PGM3O95394 542 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 MMP1P03956 469 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 VPREB1P12018 145 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ANOS1P23352 680 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 CMA1P23946 247 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 DNASE1P24855 282 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ADORA1P30542 326 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 CDKN1AP38936 164 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ARSEP51690 589 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 TIMM10P62072 90 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 RPS18P62269 152 aaKnown RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 FKBP1AP62942 108 aaKnown RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 PNRC1Q12796 327 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 ITPK1Q13572 414 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 RBM39Q14498 530 aaKnown RBP3.82□□□□□ -1.8
EDEM3-205ENST00000466606 NTRK2Q16620 822 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 SUSD4Q5VX71 490 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 TMEM211Q6ICI0 200 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 CORO6Q6QEF8 472 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 TBC1D10CQ8IV04 446 aa3.82□□□□□ -1.8
EDEM3-205ENST00000466606 FOXP4Q8IVH2 680 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms