RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MXRA7P84157 204 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 PERM1Q5SV97 790 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 SCUBE1Q8IWY4 988 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 KLHDC8AQ8IYD2 350 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 FBXO27Q8NI29 283 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 MED8Q96G25 268 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 SGPP1Q9BX95 441 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 RNPEPL1Q9HAU8 725 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 SPHK1Q9NYA1 384 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC22A14Q9Y267 594 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 TNPO3Q9Y5L0 923 aaKnown RBP16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 CEP250Q9BV73 2442 aa16.32■□□□□ 0.2
EXOSC3-203ENST00000465229 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 PRICKLE3O43900 615 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 RPS17P08708 135 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 CHRM5P08912 532 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 CKMT2P17540 419 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 PEBP1P30086 187 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 EPHA4P54764 986 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 TBPL1P62380 186 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 DAB2P98082 770 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 ZRSR2Q15696 482 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 CAPN13Q6MZZ7 669 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 RPS27LQ71UM5 84 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 NET1Q7Z628 596 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 Q8N9G6 341 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 BAHD1Q8TBE0 780 aaPredicted RBP16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 RSC1A1Q92681 617 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 NAT6Q93015 286 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 OR4K3Q96R72 315 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 SLC32A1Q9H598 525 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 HRASLS2Q9NWW9 162 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 FTSJ1Q9UET6 329 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 DMXL1Q9Y485 3027 aa16.31■□□□□ 0.2
EXOSC3-203ENST00000465229 IGHV1OR21-1A0A087WYE8 117 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 OR5K3A6NET4 321 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 E2F3O00716 465 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CCNT2O60583 730 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 NPPBP16860 134 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 AMD1P17707 334 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 POLR2CP19387 275 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CDC16Q13042 620 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 LCP2Q13094 533 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 TSTA3Q13630 321 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 TRMT5Q32P41 509 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 UGT3A2Q3SY77 523 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 NKAIN2Q5VXU1 208 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 NXNQ6DKJ4 435 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 METTL2BQ6P1Q9 378 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 SPRED1Q7Z699 444 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 THOC6Q86W42 341 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 ULK2Q8IYT8 1036 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 POU5F2Q8N7G0 328 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 OR10G6Q8NH81 332 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 TNFRSF12AQ9NP84 129 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 PCTPQ9UKL6 214 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 UNC13CQ8NB66 2214 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 PIPSLA2A3N6 862 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 K7EPI3 171 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CASC3O15234 703 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CIB2O75838 187 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 WDR47O94967 919 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 PROS1P07225 676 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CD1CP29017 333 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 ATP4BP51164 291 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 LIMK1P53667 647 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 SH3BP2P78314 561 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CLCQ05315 142 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 C6orf163Q5TEZ5 329 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 PIP4P1Q86T03 277 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 OR2A1Q8NGT9 310 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 IFI44Q8TCB0 444 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 ZNF483Q8TF39 744 aaPredicted RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 NSUN5Q96P11 429 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 CCDC3Q9BQI4 270 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 THTPAQ9BU02 230 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 ACAT2Q9BWD1 397 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 EVA1BQ9NVM1 165 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
EXOSC3-203ENST00000465229 A0A088AWK7 358 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 AZIN1O14977 448 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 MLYCDO95822 493 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 ACP1P24666 158 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 PSMB5P28074 263 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 CAPZBP47756 277 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 CDH13P55290 713 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 YBX1P67809 324 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 AMZ1Q400G9 498 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 THEMIS2Q5TEJ8 643 aa16.29■□□□□ 0.2
EXOSC3-203ENST00000465229 KANK2Q63ZY3 851 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms