RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 AP3B1O00203 1094 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 CRYABP02511 175 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 HEXBP07686 556 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 MYBL2P10244 700 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 ERGP11308 486 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 ICAM2P13598 275 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 ATP5DP30049 168 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 SLC26A3P40879 764 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 SESN2P58004 480 aaPredicted RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 YBX1P67809 324 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 EEF1A2Q05639 463 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 ANKRD20A4Q4UJ75 823 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 CTSL3PQ5NE16 218 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 GARNL3Q5VVW2 1013 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 PRUNE1Q86TP1 453 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 OR9A1PQ8NGU1 263 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 DNAJB8Q8NHS0 232 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 SMPDL3AQ92484 453 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 PHF12Q96QT6 1004 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 ACAT2Q9BWD1 397 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 IL22Q9GZX6 179 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 RNF32Q9H0A6 362 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 UTP6Q9NYH9 597 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 ABI3Q9P2A4 366 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 RNF14Q9UBS8 474 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 SUCOQ9UBS9 1254 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 RUVBL1Q9Y265 456 aaKnown RBP18.8■□□□□ 0.6
VARS-221ENST00000463184 CSMD1Q96PZ7 3565 aa18.8■□□□□ 0.6
VARS-221ENST00000463184 LOC102723996A0A087X1L8 192 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 GOLGA6L10A0A0M3HER8 536 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 H3BMM5 538 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 TUBB4AP04350 444 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 UQCRHP07919 91 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 ANXA5P08758 320 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 RPA3P35244 121 aaPredicted RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 NPY2RP49146 381 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 GBX1Q14549 363 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 ARHGAP19Q14CB8 494 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 CYP1B1Q16678 543 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.79■□□□□ 0.6
VARS-221ENST00000463184 TMEM207Q6UWW9 146 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 SDCCAG8Q86SQ7 713 aaPredicted RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 CREG2Q8IUH2 290 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 CSNK1A1LQ8N752 337 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 ITLN2Q8WWU7 325 aaPredicted RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 MAGOHBQ96A72 148 aaKnown RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 MMABQ96EY8 250 aaPredicted RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 C16orf45Q96MC5 204 aaPredicted RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 BIRC8Q96P09 236 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 ZNF700Q9H0M5 742 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 EIF2B3Q9NR50 452 aaKnown RBP18.79■□□□□ 0.6
VARS-221ENST00000463184 BFARQ9NZS9 450 aa18.79■□□□□ 0.6
VARS-221ENST00000463184 TXNDC9O14530 226 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 PFDN6O15212 129 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 RASAL1O95294 804 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 WDPCPO95876 746 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 PKMP14618 531 aaKnown RBP18.78■□□□□ 0.6
VARS-221ENST00000463184 NMBRP28336 390 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 FMO4P31512 558 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 HSD17B2P37059 387 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 KCNJ1P48048 391 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 CRADDP78560 199 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 RELAQ04206 551 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 RNF187Q5TA31 235 aaPredicted RBP18.78■□□□□ 0.6
VARS-221ENST00000463184 FAAH2Q6GMR7 532 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 MRNIPQ6NTE8 343 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 MTFR2Q6P444 385 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 LRRC8BQ6P9F7 803 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 SUSD1Q6UWL2 747 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 PAQR7Q86WK9 346 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 OTUD6BQ8N6M0 293 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 AMER3Q8N944 861 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 SUN3Q8TAQ9 357 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 RERGQ96A58 199 aaPredicted RBP18.78■□□□□ 0.6
VARS-221ENST00000463184 CAPZA3Q96KX2 299 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 OR2A5Q96R48 311 aa18.78■□□□□ 0.6
VARS-221ENST00000463184 TRGV8A0A0C4DH27 118 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 IGKV1-8A0A0C4DH67 115 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 ZNF839A8K0R7 811 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 MYO1CO00159 1063 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 FFAR3O14843 346 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 GPR42O15529 346 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 UNC5CO95185 931 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 CELA2AP08217 269 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 ITGAMP11215 1152 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 RPL22P35268 128 aaKnown RBP18.77■□□□□ 0.6
VARS-221ENST00000463184 PAFAH1B1P43034 410 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 ADARP55265 1226 aaKnown RBP18.77■□□□□ 0.6
VARS-221ENST00000463184 PRDX1Q06830 199 aaKnown RBP18.77■□□□□ 0.6
VARS-221ENST00000463184 PCOLCEQ15113 449 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 HKDC1Q2TB90 917 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.77■□□□□ 0.6
VARS-221ENST00000463184 ABHD17BQ5VST6 288 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 HIBCHQ6NVY1 386 aaPredicted RBP18.77■□□□□ 0.6
VARS-221ENST00000463184 TMEM205Q6UW68 189 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 C4orf22Q6V702 233 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 GSTA5Q7RTV2 222 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 LPGAT1Q92604 370 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 TCF12Q99081 682 aa18.77■□□□□ 0.6
VARS-221ENST00000463184 TUBB6Q9BUF5 446 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms