RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.9□□□□□ -0.821e-10■■■■■ 27.8
HDLBP-227ENST00000458564 SYNPO2LQ9H987 977 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 CHRAC1Q9NRG0 131 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 RAB6BQ9NRW1 208 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 STOX2Q9P2F5 926 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 SEC14L3Q9UDX4 400 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 TEKT2Q9UIF3 430 aa9.9□□□□□ -0.82
HDLBP-227ENST00000458564 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-227ENST00000458564 MTORP42345 2549 aa9.9□□□□□ -0.83
HDLBP-227ENST00000458564 PCNX1Q96RV3 2341 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 H3BMM5 538 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 CCL21O00585 134 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 TXNDC9O14530 226 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 FOXS1O43638 330 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 SLC19A2O60779 497 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 IFNB1P01574 187 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 HEXBP07686 556 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 APRTP07741 180 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 PKMP14618 531 aaKnown RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 COX6B1P14854 86 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 ARNTP27540 789 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 EFNA3P52797 238 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 FAM53BQ14153 422 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 TYSND1Q2T9J0 566 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 HKDC1Q2TB90 917 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 ANKRD20A4Q4UJ75 823 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 PCID2Q5JVF3 399 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 CTSL3PQ5NE16 218 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 ABHD17BQ5VST6 288 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 OR9A1PQ8NGU1 263 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 SUN3Q8TAQ9 357 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 THAP3Q8WTV1 239 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 LPGAT1Q92604 370 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 MMABQ96EY8 250 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 TRIM5Q9C035 493 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 IL22Q9GZX6 179 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 MRPS30Q9NP92 439 aaKnown RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 EIF2B3Q9NR50 452 aaKnown RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 UTP6Q9NYH9 597 aaKnown RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 PAK5Q9P286 719 aa9.89□□□□□ -0.83
HDLBP-227ENST00000458564 NCOA6Q14686 2063 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-227ENST00000458564 A0A0U1RQJ8 604 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ARHGEF33A8MVX0 844 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 FFAR3O14843 346 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 GPR42O15529 346 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 PSIP1O75475 530 aaKnown RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 NDUFS3O75489 264 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 CCNDBP1O95273 360 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 FTCDO95954 541 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 F10P00742 488 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ESR1P03372 595 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 UQCRHP07919 91 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ANXA5P08758 320 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 C8orf89P0DMQ9 161 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 RPA3P35244 121 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 HSD17B2P37059 387 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 CASP6P55212 293 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 EIF3BP55884 814 aaKnown RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 PRDX1Q06830 199 aaKnown RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 RNF187Q5TA31 235 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ICE2Q659A1 982 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 PLAG1Q6DJT9 500 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 FAAH2Q6GMR7 532 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 H3F3CQ6NXT2 135 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 LRRC8BQ6P9F7 803 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 Q6ZPB1 254 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 NEK10Q6ZWH5 1172 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 FBXO15Q8NCQ5 510 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ACRBPQ8NEB7 543 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 RERGQ96A58 199 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 VN1R1Q9GZP7 353 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 FAM114A2Q9NRY5 505 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 MKL2Q9ULH7 1088 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF835Q9Y2P0 537 aa9.88□□□□□ -0.83
HDLBP-227ENST00000458564 SETD2Q9BYW2 2564 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-227ENST00000458564 A0A0A6YYC8 382 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ASPDHA6ND91 283 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF839A8K0R7 811 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 H0YIG0 161 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 I3L1I5 382 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-227ENST00000458564 AP3B1O00203 1094 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 P2RX6O15547 441 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 NIPSNAP2O75323 286 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 CATP04040 527 aaKnown RBP9.87□□□□□ -0.83
HDLBP-227ENST00000458564 CRADDP78560 199 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ABATP80404 500 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF33BQ06732 778 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF766Q5HY98 468 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ARMC3Q5W041 872 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 MRNIPQ6NTE8 343 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 SUSD1Q6UWL2 747 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 PCGF5Q86SE9 256 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 KIAA1328Q86T90 577 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
HDLBP-227ENST00000458564 CCDC89Q8N998 374 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms