RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ABATP80404 500 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 SARNPP82979 210 aaKnown RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 TPSAB1Q15661 275 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 LRRC8BQ6P9F7 803 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 NEK10Q6ZWH5 1172 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 FBXO15Q8NCQ5 510 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 MARVELD3Q96A59 401 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 MFSD3Q96ES6 412 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 MMABQ96EY8 250 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 MAGEB10Q96LZ2 347 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 OR2A5Q96R48 311 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 EBNA1BP2Q99848 306 aaKnown RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 DRC3Q9H069 523 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 KLHL42Q9P2K6 505 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 GUCA1BQ9UMX6 200 aa20.46■□□□□ 0.87
CPNE1-220ENST00000458038 RUVBL1Q9Y265 456 aaKnown RBP20.46■□□□□ 0.87
CPNE1-220ENST00000458038 PCNX1Q96RV3 2341 aa20.45■□□□□ 0.87
CPNE1-220ENST00000458038 KRT87PA6NCN2 255 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 E5RI56 91 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 NIPSNAP2O75323 286 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 CRYABP02511 175 aaKnown RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 MGAT1P26572 445 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 PNLIPRP1P54315 467 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 NAA30Q147X3 362 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 NDUFA9Q16795 377 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 KLHL38Q2WGJ6 581 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 TTLL9Q3SXZ7 439 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 MEI1Q5TIA1 1274 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 ICE2Q659A1 982 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 SP5Q6BEB4 398 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 KIAA0930Q6ICG6 404 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 ZNF425Q6IV72 752 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 SUSD1Q6UWL2 747 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 FJX1Q86VR8 437 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 AMER3Q8N944 861 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 SUN3Q8TAQ9 357 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 MESP1Q9BRJ9 268 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 ZNF700Q9H0M5 742 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 RBSNQ9H1K0 784 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 HOMER3Q9NSC5 361 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 INTS10Q9NVR2 710 aaKnown RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 STOX2Q9P2F5 926 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-220ENST00000458038 COPG2Q9UBF2 871 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 TEKT2Q9UIF3 430 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 CRYL1Q9Y2S2 319 aa20.45■□□□□ 0.86
CPNE1-220ENST00000458038 TDGF1P3P51864 188 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 ART3Q13508 389 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 SIX1Q15475 284 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-220ENST00000458038 ACSBG2Q5FVE4 666 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 MTFR2Q6P444 385 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 TMEM205Q6UW68 189 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 SIRT6Q8N6T7 355 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 MOCOSQ96EN8 888 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 TUBB6Q9BUF5 446 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.44■□□□□ 0.865e-12■■■■□ 21.5
CPNE1-220ENST00000458038 SYBUQ9NX95 663 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 PLA2G3Q9NZ20 509 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 ABI3Q9P2A4 366 aa20.44■□□□□ 0.86
CPNE1-220ENST00000458038 TEP1Q99973 2627 aaKnown RBP20.43■□□□□ 0.86
CPNE1-220ENST00000458038 IGKV1-8A0A0C4DH67 115 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 HRH2P25021 359 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 YBX1P67809 324 aaKnown RBP20.43■□□□□ 0.86
CPNE1-220ENST00000458038 EEF1A2Q05639 463 aaKnown RBP20.43■□□□□ 0.86
CPNE1-220ENST00000458038 HKDC1Q2TB90 917 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 ABHD17BQ5VST6 288 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 NEPROQ6NW34 567 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 GFRALQ6UXV0 394 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 CILP2Q8IUL8 1156 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 ARHGEF39Q8N4T4 335 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 METTL21AQ8WXB1 218 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 TAAR6Q96RI8 345 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 PKP4Q99569 1192 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 SUCOQ9UBS9 1254 aaKnown RBP20.43■□□□□ 0.86
CPNE1-220ENST00000458038 TAC3Q9UHF0 121 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 MKL2Q9ULH7 1088 aa20.43■□□□□ 0.86
CPNE1-220ENST00000458038 KLF2Q9Y5W3 355 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-220ENST00000458038 PKDREJQ9NTG1 2253 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 MAGEB16A2A368 324 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 E7ENX8 843 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 SLC16A8O95907 504 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 CDC25BP30305 580 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 AVPR1BP47901 424 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 TAP2Q03519 686 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 TSTA3Q13630 321 aaPredicted RBP20.42■□□□□ 0.86
CPNE1-220ENST00000458038 LONRF1Q17RB8 773 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 CES3Q6UWW8 571 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 TMEM207Q6UWW9 146 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 REXO1L1PQ8IX06 675 aa20.42■□□□□ 0.86
CPNE1-220ENST00000458038 SRRM1Q8IYB3 904 aaKnown RBP20.42■□□□□ 0.86
CPNE1-220ENST00000458038 TSR3Q9UJK0 312 aaKnown RBP20.42■□□□□ 0.86
CPNE1-220ENST00000458038 GOLGA8KD6RF30 607 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 PRSS44E7EML9 344 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 GOLGA8TH3BQL2 631 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 FOXS1O43638 330 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 RASAL1O95294 804 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 WDPCPO95876 746 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 ENO3P13929 434 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-220ENST00000458038 CLCN7P51798 805 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms