RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ZBTB20Q9HC78 741 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 MLXIPLQ9NP71 852 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 DHCR7Q9UBM7 475 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 VPS4AQ9UN37 437 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ICKQ9UPZ9 632 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CDYLQ9Y232 598 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ASF1AQ9Y294 204 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PTRH2Q9Y3E5 179 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TNPO3Q9Y5L0 923 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 HEBP2Q9Y5Z4 205 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ASH1LQ9NR48 2969 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TENM4Q6N022 2769 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 NUP210LQ5VU65 1888 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC5A10A0PJK1 596 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 A1L4Q6 167 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KLHL33A6NCF5 533 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KRT87PA6NCN2 255 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 MROH6A6NGR9 719 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 H3BMH7 237 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 H7C0S8 307 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CNOT3O75175 753 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 ALOX12BO75342 701 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KLF7O75840 302 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CEACAM4O75871 244 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2B3O76000 313 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SORBS2O94875 1100 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 AGFG2O95081 481 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 AP2A1O95782 977 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GOT2P00505 430 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 IFNB1P01574 187 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CHRM5P08912 532 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 RAB40ALP0C0E4 278 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 ZSCAN5DPP0CG00 497 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GP1BBP13224 206 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 AGXTP21549 392 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 MCM3P25205 808 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 MSNP26038 577 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 PEBP1P30086 187 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CCR7P32248 378 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 FOXN2P32314 431 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 PTPN7P35236 360 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 NSG1P42857 185 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GABRA4P48169 554 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CD151P48509 253 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 VAV2P52735 878 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 HK2P52789 917 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 TERF1P54274 439 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CRADDP78560 199 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GUCY1A3Q02108 690 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 HSPA14Q0VDF9 509 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KLF1Q13351 362 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SEMA3AQ14563 771 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SSPNQ14714 243 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 NCF4Q15080 339 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KYNUQ16719 465 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 TM4SF20Q53R12 229 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 FHL5Q5TD97 284 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF449Q6P9G9 518 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SPESP1Q6UW49 350 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SHISA6Q6ZSJ9 500 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 HOOK3Q86VS8 718 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 TMEM139Q8IV31 216 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 KLHDC8BQ8IXV7 354 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GPR135Q8IZ08 494 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 DNAJC22Q8N4W6 341 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 AMER2Q8N7J2 671 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 DNAAF3Q8N9W5 541 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 Q8NA96 180 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 GLIS1Q8NBF1 620 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SPC24Q8NBT2 197 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 TMEM52Q8NDY8 209 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 OR13J1Q8NGT2 312 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC35B2Q8TB61 432 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 LKAAEAR1Q8TD35 194 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 HEXDCQ8WVB3 486 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 C1orf54Q8WWF1 131 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 LRFN5Q96NI6 719 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 ALS2CR12Q96Q35 445 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 BAG1Q99933 345 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 PITPNM3Q9BZ71 974 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 LRRC40Q9H9A6 602 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SYTL2Q9HCH5 934 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SLAMF7Q9NQ25 335 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 LUC7LQ9NQ29 371 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 CASS4Q9NQ75 786 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 IRAK4Q9NWZ3 460 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 STOX2Q9P2F5 926 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC5A6Q9Y289 635 aa4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 PCDHGA9Q9Y5G4 932 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-208ENST00000455546 SPTAN1Q13813 2472 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 POLEQ07864 2286 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 A0A0J9YY10 115 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GOLGA6L9A6NEM1 432 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 BTNL10A8MVZ5 291 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 C9J4A7 227 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms