RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DUSP8Q13202 625 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 IL23RQ5VWK5 629 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 LAYNQ6UX15 382 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PGAM4Q8N0Y7 254 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 C10orf111Q8N326 155 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 MINDY1Q8N5J2 469 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 OR52E1Q8NGJ3 308 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 NEIL2Q969S2 332 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 TBC1D20Q96BZ9 403 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 CAMK1GQ96NX5 476 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 OR2M4Q96R27 311 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GPR174Q9BXC1 333 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 TPSD1Q9BZJ3 242 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PRDM7Q9NQW5 492 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 POT1Q9NUX5 634 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SLC39A10Q9ULF5 831 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 MAD1L1Q9Y6D9 718 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 IGKV3D-11A0A0A0MRZ8 115 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 UBA6A0AVT1 1052 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 LNP1A1A4G5 178 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 KPNA5O15131 536 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 P2RX6O15547 441 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 NUDT21O43809 227 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 DNAJB6O75190 326 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 WDR47O94967 919 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ANP32DO95626 131 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 FTH1P02794 183 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 HSD17B1P14061 328 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 JUPP14923 745 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ACVR2AP27037 513 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 GRIA3P42263 894 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PCBP4P57723 403 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 PLOD1Q02809 727 aaPredicted RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 ITKQ08881 620 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 BLMHQ13867 455 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ACOX1Q15067 660 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PERM1Q5SV97 790 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 LIPJQ5W064 366 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 BLOC1S3Q6QNY0 202 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 SUSD1Q6UWL2 747 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 UGT2A3Q6UWM9 527 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ZNF793Q6ZN11 406 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 FAM110BQ8TC76 370 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ADAMTS16Q8TE57 1224 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 HMGB4Q8WW32 186 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ELMO2Q96JJ3 720 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 CCDC138Q96M89 665 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 KCNA7Q96RP8 456 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 FERMT1Q9BQL6 677 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 NUSAP1Q9BXS6 441 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 B3GNT4Q9C0J1 378 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ABCG4Q9H172 646 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ZNF768Q9H5H4 540 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 DCLRE1BQ9H816 532 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 YY1AP1Q9H869 796 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 ARMC1Q9NVT9 282 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 AIG1Q9NVV5 245 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 NMRK1Q9NWW6 199 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PCDHGB4Q9UN71 923 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 RUVBL2Q9Y230 463 aaKnown RBP4.76□□□□□ -1.65
RIF1-207ENST00000454583 MAN2B2Q9Y2E5 1009 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PCDHGB5Q9Y5G0 923 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 PTGDR2Q9Y5Y4 395 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 RNF215Q9Y6U7 377 aa4.76□□□□□ -1.65
RIF1-207ENST00000454583 WDR91A4D1P6 747 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 EME2A4GXA9 379 aaPredicted RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 OR2AG2A6NM03 316 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 EEDO75530 441 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 KRT36O76013 467 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 FKBP9O95302 570 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 THRAP10827 490 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 MAN2A2P49641 1150 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 RAD51Q06609 339 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 ABRAXAS2Q15018 415 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 PDCD4Q53EL6 469 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 TMEM198Q66K66 360 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 TMEM214Q6NUQ4 689 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 DUS1LQ6P1R4 473 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 USP51Q70EK9 711 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 CUZD1Q86UP6 607 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 TMEM151BQ8IW70 566 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 AMER3Q8N944 861 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 TSTD1Q8NFU3 115 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 OR2L3Q8NG85 312 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 PATE1Q8WXA2 126 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 TSPAN17Q96FV3 270 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 ZNF681Q96N22 645 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 CCDC115Q96NT0 180 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 ALG9Q9H6U8 611 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 MVB12BQ9H7P6 319 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 SLC22A11Q9NSA0 550 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 FARSBQ9NSD9 589 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 POLG2Q9UHN1 485 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 DCTN4Q9UJW0 460 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 BTBD3Q9Y2F9 522 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 AP1M2Q9Y6Q5 423 aa4.75□□□□□ -1.65
RIF1-207ENST00000454583 TOX3O15405 576 aaPredicted RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 CNOT3O75175 753 aaKnown RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 GCM2O75603 506 aaPredicted RBP4.75□□□□□ -1.65
RIF1-207ENST00000454583 GP1BAP07359 652 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms