RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TMEM79Q9BSE2 394 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 GPR87Q9BY21 358 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 UNKQ9C0B0 810 aaKnown RBP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 TMEM184CQ9NVA4 438 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 UTP6Q9NYH9 597 aaKnown RBP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 DHCR7Q9UBM7 475 aaKnown RBP13.55□□□□□ -0.24
HDAC4-205ENST00000454542 FETUBQ9UGM5 382 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 SNX7Q9UNH6 387 aa13.55□□□□□ -0.24
HDAC4-205ENST00000454542 CACNA1GO43497 2377 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ATMQ13315 3056 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 IGSF10Q6WRI0 2623 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 KCNE1BA0A087WTH5 132 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 A0A087X1B8 175 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 A0A1B0GX78 115 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 H0YGG7 62 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ERVH48-1M5A8F1 160 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 DSCR3O14972 297 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 KERAO60938 352 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 MED26O95402 600 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ITGB2P05107 769 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 C2P06681 752 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 KLK3P07288 261 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-205ENST00000454542 INHBAP08476 426 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 TCN2P20062 427 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 CNTFP26441 200 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 GGT5P36269 586 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ARSFP54793 590 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 VSX2P58304 361 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ARF3P61204 181 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-205ENST00000454542 IRF9Q00978 393 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 MC1RQ01726 317 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 NCF4Q15080 339 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 PTCHD3Q3KNS1 767 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 THEMIS2Q5TEJ8 643 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 MROH9Q5TGP6 573 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 FAM199XQ6PEV8 388 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-205ENST00000454542 FRA10AC1Q70Z53 315 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 VN1R4Q7Z5H5 301 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ISCA2Q86U28 154 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 TCAIMQ8N3R3 496 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 SPATA6LQ8N4H0 392 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 TTC29Q8NA56 475 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ZSCAN1Q8NBB4 408 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 MR1Q95460 341 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 NDC1Q9BTX1 674 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 NLNQ9BYT8 704 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 ACTL8Q9H568 366 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 CUTCQ9NTM9 273 aa13.54□□□□□ -0.24
HDAC4-205ENST00000454542 PCSK5Q92824 1860 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 EXOC1LA0A1B0GW35 172 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 H7BY64 318 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TAPBPO15533 448 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 P2RX6O15547 441 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 LTA4HP09960 611 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 CDH1P12830 882 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TFEBP19484 476 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 PTPN4P29074 926 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 RPS15AP62244 130 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 REEP5Q00765 189 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 UAP1Q16222 522 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 MRPL14Q6P1L8 145 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 RAPH1Q70E73 1250 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 COX15Q7KZN9 410 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 SYVN1Q86TM6 617 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 RHEBL1Q8TAI7 183 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 UBTD2Q8WUN7 234 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 SLC5A11Q8WWX8 675 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 NEIL2Q969S2 332 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 FKBP10Q96AY3 582 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 MRRFQ96E11 262 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 WBP1Q96G27 269 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 PRAP1Q96NZ9 151 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 GPR78Q96P69 363 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 C17orf62Q9BQA9 187 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 PELI2Q9HAT8 420 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 SLC22A11Q9NSA0 550 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 NUDT4Q9NZJ9 180 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
HDAC4-205ENST00000454542 ACOT9Q9Y305 439 aa13.53□□□□□ -0.24
HDAC4-205ENST00000454542 SEC16AO15027 2179 aa13.52□□□□□ -0.24
HDAC4-205ENST00000454542 A0A096LPK6 155 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 NKX2-8O15522 239 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 CNOT3O75175 753 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 CREG1O75629 220 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 KRT38O76015 456 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 MTHFD2P13995 350 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 BCL6P41182 706 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 RPS18P62269 152 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms