RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SLC25A3Q00325 362 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SORDQ00796 357 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CNTN2Q02246 1040 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CACNG1Q06432 222 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GRIK3Q13003 919 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GPR176Q14439 515 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 EIF4HQ15056 248 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MAPK6Q16659 721 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TBC1D25Q3MII6 688 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCDC14Q49A88 953 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATF7IP2Q5U623 682 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PLCXD3Q63HM9 321 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SEL1L3Q68CR1 1132 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKS6Q68DC2 871 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD16Q6P6B7 361 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SYT10Q6XYQ8 523 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 QSOX2Q6ZRP7 698 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 NRARPQ7Z6K4 114 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 YRDCQ86U90 279 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TBC1D26Q86UD7 250 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PAQR7Q86WK9 346 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 KBTBD2Q8IY47 623 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GCNT2Q8N0V5 402 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF611Q8N823 705 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKFN1Q8N957 763 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CSNK2A3Q8NEV1 391 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR6S1Q8NH40 331 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ERMNQ8TAM6 284 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRMT10AQ8TBZ6 339 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PNPT1Q8TCS8 783 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 U2AF1L4Q8WU68 220 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 LENG9Q96B70 501 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 FEVQ99581 238 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM79Q9BSE2 394 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM43Q9BTV4 400 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 FTHL17Q9BXU8 183 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 WWP1Q9H0M0 922 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF768Q9H5H4 540 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRRC19Q9H756 370 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM185BQ9H7F4 350 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SFXN1Q9H9B4 322 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SGK2Q9HBY8 427 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MMP25Q9NPA2 562 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PDGFCQ9NRA1 345 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM248Q9NWD8 314 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MTMR10Q9NXD2 777 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ARL15Q9NXU5 204 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ONECUT1Q9UBC0 465 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 COPS7AQ9UBW8 275 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 HMGXB4Q9UGU5 601 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADAM29Q9UKF5 820 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF510Q9Y2H8 683 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 LSM4Q9Y4Z0 139 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CEPT1Q9Y6K0 416 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 EVC2Q86UK5 1308 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 A0A0J9YYE9 177 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ILVBLA1L0T0 632 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM221A6NGB7 291 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD66B4E2M5 251 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MATN2O00339 956 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 PTGESO14684 152 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF197O14709 1029 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 LSM1O15116 133 aaKnown RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 HDAC3O15379 428 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FLRT2O43155 660 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 LAMTOR5O43504 91 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ACSL4O60488 711 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FCMRO60667 390 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATP5HO75947 161 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CDK14O94921 469 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR4F21O95013 312 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CAVIN2O95810 425 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 NDUFB10O96000 172 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRBC1P01850 177 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 C9P02748 559 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAB40ALP0C0E4 278 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 STAG3L1P0CL83 205 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF44P15621 663 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MX1P20591 662 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 HNF1AP20823 631 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 S1PR1P21453 382 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MATN1P21941 496 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 UGT1A1P22309 533 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TUBG1P23258 451 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC8A1P32418 973 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 EVI2BP34910 448 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FDFT1P37268 417 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPAM1P38567 509 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 GPR4P46093 362 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 KCNJ4P48050 445 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCT8P50990 548 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCR4P51679 360 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ATP12AP54707 1039 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 GSCP56915 257 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC37A1P57057 533 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 RPS15P62841 145 aaKnown RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MC2RQ01718 297 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CSTF1Q05048 431 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms