RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NMRAL1Q9HBL8 299 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 SNX15Q9NRS6 342 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 STARD5Q9NSY2 213 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 PCMTD2Q9NV79 361 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 TMEM184CQ9NVA4 438 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 CUEDC1Q9NWM3 386 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 TLK1Q9UKI8 766 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 A0A0J9YVX5 310 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 H7BY64 318 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 PYCARD-AS1I3L0S3 204 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 MEN1O00255 615 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ZSCAN9O15535 394 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ALDOAP04075 364 aaKnown RBP19.09■□□□□ 0.65
COL9A3-202ENST00000452372 LTA4HP09960 611 aaKnown RBP19.09■□□□□ 0.65
COL9A3-202ENST00000452372 FAM87AP0C7U9 286 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 SERPINB8P50452 374 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 OR4D1Q15615 310 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 CDKL4Q5MAI5 379 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 FRMPD2BQ6IN97 320 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 TAOK1Q7L7X3 1001 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ISCA2Q86U28 154 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 C17orf64Q86WR6 236 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 GPSM1Q86YR5 675 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 DSELQ8IZU8 1212 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF655Q8N720 491 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ISL2Q96A47 359 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 PRAP1Q96NZ9 151 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 EGFL8Q99944 293 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 ZFYVE21Q9BQ24 234 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 HAUS8Q9BT25 410 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 SLC7A5P2Q9GIP4 190 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 GPN2Q9H9Y4 310 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-202ENST00000452372 IGSF5Q9NSI5 407 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 IRAK4Q9NWZ3 460 aa19.09■□□□□ 0.65
COL9A3-202ENST00000452372 A0A096LPK6 155 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 TERTO14746 1132 aaKnown RBP19.08■□□□□ 0.64
COL9A3-202ENST00000452372 EZRP15311 586 aaKnown RBP19.08■□□□□ 0.64
COL9A3-202ENST00000452372 GCGRP47871 477 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 VSX2P58304 361 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-202ENST00000452372 PTCHD3Q3KNS1 767 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 RHBDD2Q6NTF9 364 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 ADGRD1Q6QNK2 874 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 CENPLQ8N0S6 344 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-202ENST00000452372 ZSCAN1Q8NBB4 408 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 STAG3L4Q8TBR4 150 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 MR1Q95460 341 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 RHBDF1Q96CC6 855 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 NXNL1Q96CM4 212 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 OR4K3Q96R72 315 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 FETUBQ9UGM5 382 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 CROTQ9UKG9 612 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 SRPK3Q9UPE1 567 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 SH2B3Q9UQQ2 575 aa19.08■□□□□ 0.64
COL9A3-202ENST00000452372 LOC105369274A0A096LPK9 316 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 LOC102723532A0A0G2JNH3 316 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 FITM1A5D6W6 292 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 TFEBP19484 476 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 TCN2P20062 427 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 F8A1P23610 371 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 GCAP28676 217 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 DEKP35659 375 aaKnown RBP19.07■□□□□ 0.64
COL9A3-202ENST00000452372 DLSTP36957 453 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 MAGEA12P43365 314 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 KCNC1P48547 511 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 ARSFP54793 590 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 IRF9Q00978 393 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 NFATC3Q12968 1075 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 FAM83EQ2M2I3 478 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 WASHC2DQ5SRD0 308 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 LGSNQ5TDP6 509 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 YOD1Q5VVQ6 348 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-202ENST00000452372 FAM199XQ6PEV8 388 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-202ENST00000452372 ADCK2Q7Z695 626 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 OR4N4Q8N0Y3 316 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 TCAIMQ8N3R3 496 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 KCTD4Q8WVF5 259 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 SLC45A3Q96JT2 553 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 OR2A5Q96R48 311 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 DPH2Q9BQC3 489 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-202ENST00000452372 NDC1Q9BTX1 674 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 ALG9Q9H6U8 611 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 KCND3Q9UK17 655 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 RNF112Q9ULX5 631 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 FER1L5A0AVI2 2057 aa19.07■□□□□ 0.64
COL9A3-202ENST00000452372 CCDC189A1A4V9 331 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 NCF1BA6NI72 391 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 NCF1CA8MVU1 366 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 C21orf140B9A014 251 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 TRIM49D1C9J1S8 452 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 H0YGG7 62 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 KLHL2O95198 593 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 SNRPAP09012 282 aaKnown RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 NCF1P14598 390 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 GGT5P36269 586 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 SLC6A12P48065 614 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 ARF3P61204 181 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 VSNL1P62760 191 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 CSNK1G2P78368 415 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 GRM7Q14831 915 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 FAM214AQ32MH5 1076 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms