RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 OR11G2Q8NGC1 345 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 EEF1AKMT1Q8WVE0 214 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 MVB12AQ96EY5 273 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 CERS2Q96G23 380 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 PDLIM2Q96JY6 352 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 CABS1Q96KC9 395 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 CAPZA3Q96KX2 299 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 CRB3Q9BUF7 120 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ZBTB20Q9HC78 741 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-208ENST00000452047 SLAMF7Q9NQ25 335 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
CPSF4-208ENST00000452047 TAS2R13Q9NYV9 303 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 SLC17A6Q9P2U8 582 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ZNF282Q9UDV7 671 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ADAMTS6Q9UKP5 1117 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 PDE10AQ9Y233 779 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 B3GNT3Q9Y2A9 372 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 NAV2Q8IVL1 2488 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 HAT1O14929 419 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 FANCGO15287 622 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 P2RX6O15547 441 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 KLHL41O60662 606 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 VPS4BO75351 444 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 IPO13O94829 963 aaKnown RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 TSPAN12O95859 305 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 C8GP07360 202 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 FBLP22087 321 aaKnown RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 GNLYP22749 145 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 SLC26A3P40879 764 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 SNRPNP63162 240 aaKnown RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 DR1Q01658 176 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 OCA2Q04671 838 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 SP140Q13342 867 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 RBBP7Q16576 425 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 PLEKHN1Q494U1 663 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 VWA2Q5GFL6 755 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 TEDDM1Q5T9Z0 273 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 STEAP4Q687X5 459 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 UGT3A1Q6NUS8 523 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 HIBCHQ6NVY1 386 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 TRMT10BQ6PF06 316 aaKnown RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 PAQR3Q6TCH7 311 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 MBOAT1Q6ZNC8 495 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 PLD3Q8IV08 490 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 PDIK1LQ8N165 341 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 AMER3Q8N944 861 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 GABPB2Q8TAK5 448 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 MIEF2Q96C03 454 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 CCDC177Q9NQR7 707 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-208ENST00000452047 ABCF3Q9NUQ8 709 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 VPS4AQ9UN37 437 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 SH2B3Q9UQQ2 575 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 TEX264Q9Y6I9 313 aa11.87□□□□□ -0.51
CPSF4-208ENST00000452047 ESPL1Q14674 2120 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 A0A1W2PQ72 361 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 H7BY64 318 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 FOXS1O43638 330 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 ITGA3P26006 1051 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 ELK3P41970 407 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CARSP49589 748 aaKnown RBP11.86□□□□□ -0.51
CPSF4-208ENST00000452047 RGS4P49798 205 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 GNG11P61952 73 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 Q0VFX4 171 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 PHKG1Q16816 387 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CRB2Q5IJ48 1285 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 THEMIS2Q5TEJ8 643 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 ATG9BQ674R7 924 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 IGFL2Q6UWQ7 119 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 Q6ZS92 163 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 VN1R4Q7Z5H5 301 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 KLHL7Q8IXQ5 586 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 RERGQ96A58 199 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-208ENST00000452047 LRRC39Q96DD0 335 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 LINGO1Q96FE5 620 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 RUNDC3BQ96NL0 473 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 PRAP1Q96NZ9 151 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 NAPGQ99747 312 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-208ENST00000452047 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 DRC3Q9H069 523 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 PARVBQ9HBI1 364 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 TRPC4Q9UBN4 977 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 C3orf18Q9UK00 162 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 PYCARDQ9ULZ3 195 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CDC14AQ9UNH5 594 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CHMP2BQ9UQN3 213 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 CSAG2Q9Y5P2 127 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
CPSF4-208ENST00000452047 SPTBN1Q01082 2364 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms