RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KANK2Q63ZY3 851 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 LAMTOR1Q6IAA8 161 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 SYVN1Q86TM6 617 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 KBTBD8Q8NFY9 601 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC22A8Q8TCC7 542 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 FRMD6Q96NE9 622 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 SPATA9Q9BWV2 254 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 STX16O14662 325 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 RECQL5O94762 991 aaPredicted RBP13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 VNN2O95498 520 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 RIN1Q13671 783 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF235Q14590 738 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 TMEM81Q6P7N7 255 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 GLB1LQ6UWU2 654 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 RNF167Q9H6Y7 350 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 NT5MQ9NPB1 228 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 ADGRE2Q9UHX3 823 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 KLHL21Q9UJP4 597 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 MRPS7Q9Y2R9 242 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 PCDHB14Q9Y5E9 798 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 U3KQV3 271 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 KERAO60938 352 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 PPM1BO75688 479 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 JUNDP17535 347 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 ADRA1AP35348 466 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 CENPAP49450 140 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 RGS1Q08116 209 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 Q96MT0 163 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 CATSPERZQ9NTU4 200 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCN5AQ14524 2016 aa13.08□□□□□ -0.32
SYNGAP1-204ENST00000449372 ARVCFO00192 962 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CD3EAPO15446 510 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CST1P01037 141 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC39A12Q504Y0 691 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SPATA2LQ8IUW3 424 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 BLOC1S5Q8TDH9 187 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CASD1Q96PB1 797 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 KCNS3Q9BQ31 491 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 FAM8A1Q9UBU6 413 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SNX8Q9Y5X2 465 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 OAS3Q9Y6K5 1087 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZNF98A6NK75 572 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 LINC01387J3KSC0 135 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCELO95171 688 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 EFEMP2O95967 443 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 INHAP05111 366 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TIE1P35590 1138 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SOX6P35712 828 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 LAPTM5Q13571 262 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SOWAHCQ53LP3 525 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 COMMD7Q86VX2 200 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC22A4Q9H015 551 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SCML1Q9UN30 329 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 AUP1Q9Y679 476 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SMLR1H3BR10 107 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 FAM20BO75063 409 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 HMGCLP35914 325 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 ARHGAP36Q6ZRI8 547 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 HIPK1Q86Z02 1210 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TAGAPQ8N103 731 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CDC26Q8NHZ8 85 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 RIT1Q92963 219 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 AIG1Q9NVV5 245 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 EVLQ9UI08 416 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MUTYHQ9UIF7 546 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TRAPPC4Q9Y296 219 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 A0A0B4J203 849 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 UBA6A0AVT1 1052 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 WASH4PA8MWX3 477 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 DFNA5O60443 496 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MAFKO60675 156 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 PAGE1O75459 146 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 GNRH1P01148 92 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 HLA-DQB2P05538 268 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPR15P49685 360 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 NFE2L1Q14494 772 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 AANATQ16613 207 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 FIP1L1Q6UN15 594 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 FAM126BQ8IXS8 530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms