RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EZRP15311 586 aaKnown RBP22.59■■□□□ 1.21
VARS-217ENST00000440048 RELAQ04206 551 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 KCNAB2Q13303 367 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 USP10Q14694 798 aaKnown RBP22.59■■□□□ 1.21
VARS-217ENST00000440048 PPP1R3AQ16821 1122 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 FAM214AQ32MH5 1076 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 GLE1Q53GS7 698 aaKnown RBP22.59■■□□□ 1.21
VARS-217ENST00000440048 ADAMTS17Q8TE56 1095 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 THAP4Q8WY91 577 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 FBXL8Q96CD0 374 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 PRAP1Q96NZ9 151 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 OR2A5Q96R48 311 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 SH2B3Q9UQQ2 575 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 MAN2B2Q9Y2E5 1009 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 PADI2Q9Y2J8 665 aa22.59■■□□□ 1.21
VARS-217ENST00000440048 MED13Q9UHV7 2174 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 KLF7O75840 302 aaPredicted RBP22.58■■□□□ 1.21
VARS-217ENST00000440048 FAM155BO75949 473 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 MED26O95402 600 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 GUCA1CO95843 209 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 CCND1P24385 295 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 HRH2P25021 359 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 PRTGQ2VWP7 1150 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 GRTP1Q5TC63 336 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 MRPL14Q6P1L8 145 aaKnown RBP22.58■■□□□ 1.21
VARS-217ENST00000440048 PLD3Q8IV08 490 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 OR56A3Q8NH54 315 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 ATL1Q8WXF7 558 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 IFT81Q8WYA0 676 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 TSPAN17Q96FV3 270 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 FAM129AQ9BZQ8 928 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 TMEM184CQ9NVA4 438 aa22.58■■□□□ 1.21
VARS-217ENST00000440048 MTRF1LQ9UGC7 380 aaKnown RBP22.58■■□□□ 1.21
VARS-217ENST00000440048 B8ZZF3 427 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 PHGDHO43175 533 aaKnown RBP22.57■■□□□ 1.2
VARS-217ENST00000440048 CNOT3O75175 753 aaKnown RBP22.57■■□□□ 1.2
VARS-217ENST00000440048 ONECUT2O95948 504 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 SPRP35270 261 aaPredicted RBP22.57■■□□□ 1.2
VARS-217ENST00000440048 NAB1Q13506 487 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 EFTUD2Q15029 972 aaKnown RBP eCLIP22.57■■□□□ 1.22e-6■■■■■ 30.2
VARS-217ENST00000440048 CAPN13Q6MZZ7 669 aaPredicted RBP22.57■■□□□ 1.2
VARS-217ENST00000440048 LCTLQ6UWM7 567 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 C17orf64Q86WR6 236 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 DTWD1Q8N5C7 304 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 CSNK1A1LQ8N752 337 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 CEP112Q8N8E3 955 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.57■■□□□ 1.2
VARS-217ENST00000440048 PYCR2Q96C36 320 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 CTNNAL1Q9UBT7 734 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 TUBD1Q9UJT1 453 aa22.57■■□□□ 1.2
VARS-217ENST00000440048 BSNQ9UPA5 3926 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 CD63P08962 238 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 NPPBP16860 134 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 STMN1P16949 149 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 OR1D4P47884 311 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 CSNK1G2P78368 415 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 TSNQ15631 228 aaKnown RBP22.56■■□□□ 1.2
VARS-217ENST00000440048 CEP128Q6ZU80 1094 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 COX15Q7KZN9 410 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 METTL27Q8N6F8 245 aaPredicted RBP22.56■■□□□ 1.2
VARS-217ENST00000440048 RERGQ96A58 199 aaPredicted RBP22.56■■□□□ 1.2
VARS-217ENST00000440048 C10orf90Q96M02 699 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 HAUS8Q9BT25 410 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 DERL2Q9GZP9 239 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 NINJ2Q9NZG7 142 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 RUVBL1Q9Y265 456 aaKnown RBP22.56■■□□□ 1.2
VARS-217ENST00000440048 PTRH2Q9Y3E5 179 aaKnown RBP22.56■■□□□ 1.2
VARS-217ENST00000440048 OARD1Q9Y530 152 aa22.56■■□□□ 1.2
VARS-217ENST00000440048 PIM1P11309 404 aaPredicted RBP22.55■■□□□ 1.2
VARS-217ENST00000440048 PMS2P54278 862 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 EMP3P54852 163 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 FOXL2P58012 376 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 ZKSCAN8Q15776 578 aaPredicted RBP22.55■■□□□ 1.2
VARS-217ENST00000440048 MUM1Q2TAK8 710 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 HKDC1Q2TB90 917 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 UBAP2Q5T6F2 1119 aaKnown RBP22.55■■□□□ 1.2
VARS-217ENST00000440048 OVCH1Q7RTY7 1134 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 ADAMTSL2Q86TH1 951 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 RELL1Q8IUW5 271 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 APLFQ8IW19 511 aaPredicted RBP22.55■■□□□ 1.2
VARS-217ENST00000440048 SPATA6LQ8N4H0 392 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 OR2Y1Q8NGV0 311 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 FKBP10Q96AY3 582 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 CABS1Q96KC9 395 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 OR4K3Q96R72 315 aa22.55■■□□□ 1.2
VARS-217ENST00000440048 UNKQ9C0B0 810 aaKnown RBP22.55■■□□□ 1.2
VARS-217ENST00000440048 CCDC166P0CW27 439 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 CDH1P12830 882 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 ECHS1P30084 290 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 FOLR3P41439 243 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 RAB10P61026 200 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 CDKL1Q00532 357 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 NFATC3Q12968 1075 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 TMEM151BQ8IW70 566 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 FMO2Q99518 471 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 TSPYL1Q9H0U9 437 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 SLC25A18Q9H1K4 315 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 MAU2Q9Y6X3 613 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 PCSK5Q92824 1860 aa22.54■■□□□ 1.2
VARS-217ENST00000440048 ARGFXA6NJG6 315 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms