RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR4F3Q6IEY1 312 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 Q6ZNB5 142 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 GPR155Q7Z3F1 870 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 ZZZ3Q8IYH5 903 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 PAF1Q8N7H5 531 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 NDNFQ8TB73 568 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 ADAMTS19Q8TE59 1207 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 ITPKCQ96DU7 683 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 ZNF300Q96RE9 604 aaPredicted RBP15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC12A9Q9BXP2 914 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 SCN3BQ9NY72 215 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 NDRG4Q9ULP0 352 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 MAFFQ9ULX9 164 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 NPIPB15A6NHN6 443 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 EVPLLA8MZ36 301 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MRPS14O60783 128 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 JRKO75564 520 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 LRATO95237 230 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MT-ND2P03891 347 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 FABP3P05413 133 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ADH1AP07327 375 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 C8GP07360 202 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 HOXA9P31269 272 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 HPCAL1P37235 193 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ARHGDIAP52565 204 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 DUOXA1Q1HG43 343 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 VMACQ2NL98 169 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 PLPP4Q5VZY2 271 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 UBE2R2Q712K3 238 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 P2RY8Q86VZ1 359 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MFSD4AQ8N468 514 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ZFP90Q8TF47 636 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 POF1BQ8WVV4 589 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 EGLN2Q96KS0 407 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 APOLD1Q96LR9 279 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 APOL4Q9BPW4 351 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ATP13A3Q9H7F0 1226 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 FBXO8Q9NRD0 319 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 DAPK2Q9UIK4 370 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 RPS6KA6Q9UK32 745 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 GMPPBQ9Y5P6 360 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MTCL1Q9Y4B5 1905 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 OBSL1O75147 1896 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 A8MX80 341 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 IGSF6O95976 241 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 C1QCP02747 245 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 AOAHP28039 575 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 PPP3CCP48454 512 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MVKQ03426 396 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ABRQ12979 859 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MAD2L1BPQ15013 274 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ZCCHC8Q6NZY4 707 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 NEK5Q6P3R8 708 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 ERICH5Q6P6B1 374 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 LILRA6Q6PI73 481 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 TMEM150AQ86TG1 271 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 FAM217AQ8IXS0 508 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 CPA6Q8N4T0 437 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 SVOPQ8N4V2 548 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 TTC29Q8NA56 475 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 SPPL3Q8TCT6 385 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 CSGALNACT1Q8TDX6 532 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 TAMM41Q96BW9 452 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 COPS8Q99627 209 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 BTBD2Q9BX70 525 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 CCNB1IP1Q9NPC3 277 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 AASSQ9UDR5 926 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 IRAK3Q9Y616 596 aa15.89■□□□□ 0.13
CLCNKA-203ENST00000439316 MYO9BQ13459 2157 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 IGLV3-16A0A075B6K0 115 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 TMEM221A6NGB7 291 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 MYO1GB0I1T2 1018 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 E9PQ18 207 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 hCG_2039718K7EN88 272 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 M0R3G1 203 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 CLIC1O00299 241 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 NUAK1O60285 661 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 PRAMEF4O60810 478 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 ADAM23O75077 832 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 ZNF821O75541 412 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 KCNK5O95279 499 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 GPX2P18283 190 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 PRPS1L1P21108 318 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 MAGEA8P43361 318 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 VLDLRP98155 873 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 CLCA4Q14CN2 919 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 DGUOKQ16854 277 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 PRAMEF9Q5VWM5 478 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 FAM109BQ6ICB4 259 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 NOXRED1Q6NXP6 359 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 PTOV1Q86YD1 416 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 SLC22A15Q8IZD6 547 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 MINDY2Q8NBR6 621 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 DYNC2LI1Q8TCX1 351 aa15.88■□□□□ 0.13
CLCNKA-203ENST00000439316 PHF10Q8WUB8 498 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms