RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 COPG2Q9UBF2 871 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 CAMK2AQ9UQM7 478 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 MAU2Q9Y6X3 613 aa2.52□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZMYM6O95789 1325 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZFC3H1O60293 1989 aaKnown RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 MTCL1Q9Y4B5 1905 aaKnown RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 BCLAF3A2AJT9 711 aaKnown RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 PRR32B1ATL7 298 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 TNFSF14O43557 240 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 JRKO75564 520 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 NKX2-2O95096 273 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 BMP10O95393 424 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 LDHAP00338 332 aaKnown RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 KRT7P08729 469 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 DNAJB1P25685 340 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 CNTFP26441 200 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 WNT5AP41221 380 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 CTSCP53634 463 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 VAMP2P63027 116 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 PTP4A2Q12974 167 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 TRPC3Q13507 836 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ITGA7Q13683 1181 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 MAPK6Q16659 721 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 GRAMD1BQ3KR37 738 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 GTDC1Q4AE62 458 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 DUSP28Q4G0W2 176 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 FAM69AQ5T7M9 428 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 NDUFAF5Q5TEU4 345 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 PWWP2BQ6NUJ5 590 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 TRIM65Q6PJ69 517 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC5A8Q8N695 610 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 EMC1Q8N766 993 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNF611Q8N823 705 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 OR2T12Q8NG77 320 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 HM13Q8TCT9 377 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 SAAL1Q96ER3 474 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 CDCA3Q99618 268 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ARPC5LQ9BPX5 153 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 PLCXD1Q9NUJ7 323 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ABI3Q9P2A4 366 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 UBA2Q9UBT2 640 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ASIC3Q9UHC3 531 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ANAPC2Q9UJX6 822 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 MKLN1Q9UL63 735 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 YIPF1Q9Y548 306 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 CLIC4Q9Y696 253 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 CAPN7Q9Y6W3 813 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZGRF1Q86YA3 2104 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
HMGB1P18-201ENST00000438801 TRRAPQ9Y4A5 3859 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PI4KAP42356 2102 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 A0A1W2PNU3 283 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 EIF3CLB5ME19 914 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 K7ENP7 123 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 SH3BP5O60239 455 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PIP5K1CO60331 668 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 REC8O95072 547 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 EPHA2P29317 976 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 HALP42357 657 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PRCPP42785 496 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC6A12P48065 614 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 EIF3BP55884 814 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PNLIPRP3Q17RR3 467 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 SNAI3Q3KNW1 292 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNF805Q5CZA5 627 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 XKR6Q5GH73 641 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 RARS2Q5T160 578 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 INO80CQ6PI98 192 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 TMEM184AQ6ZMB5 413 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 ISCA2Q86U28 154 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 HEATR4Q86WZ0 1026 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 ERICH1Q86X53 443 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PTOV1Q86YD1 416 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 GCSAMQ8N6F7 178 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 C1orf52Q8N6N3 182 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 SLC38A9Q8NBW4 561 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 ZNRF4Q8WWF5 429 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 TMEM143Q96AN5 459 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 RNF125Q96EQ8 232 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PRAC1Q96KF2 57 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 AGAP3Q96P47 875 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 HERPUD2Q9BSE4 406 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 GTPBP2Q9BX10 602 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 PIGMQ9H3S5 423 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 TDRD3Q9H7E2 651 aaKnown RBP2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 COMMD10Q9Y6G5 202 aa2.5□□□□□ -2.01
HMGB1P18-201ENST00000438801 DYSFO75923 2080 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 PARP14Q460N5 1801 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 DMBT1Q9UGM3 2413 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 IGLV7-46A0A075B6I9 117 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 A0A087WW49 117 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 ATP2A1O14983 1001 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 GPR137BO60478 399 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 SRSF10O75494 262 aaKnown RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 TRMUO75648 421 aaKnown RBP2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 RHOBTB1O94844 696 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 MOCS3O95396 460 aa2.49□□□□□ -2.01
HMGB1P18-201ENST00000438801 F9P00740 461 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms