RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HEPHQ9BQS7 1158 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MCMBPQ9BTE3 642 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 EFCAB11Q9BUY7 163 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 POLR2J3Q9H1A7 115 aaKnown RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 ING3Q9NXR8 418 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 SLAMF8Q9P0V8 285 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MKLN1Q9UL63 735 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PCDHGA8Q9Y5G5 932 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 PCDHA9Q9Y5H5 950 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MAGED1Q9Y5V3 778 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-205ENST00000438362 HSPE1-MOB4S4R3N1 261 aa6.5□□□□□ -1.37
CSDE1-205ENST00000438362 MROH6A6NGR9 719 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 COCHO43405 550 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SERPINI2O75830 405 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ADH1AP07327 375 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ATXN1LP0C7T5 689 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ATP1B2P14415 290 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DCKP27707 260 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 KCNC1P48547 511 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CDK6Q00534 326 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CREMQ03060 361 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TPGS2Q68CL5 300 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 LRRC66Q68CR7 880 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TNFAIP8L2Q6P589 184 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DCDC5Q6ZRR9 648 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 THOC6Q86W42 341 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TRIM48Q8IWZ4 208 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 HS3ST5Q8IZT8 346 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 OR52L1Q8NGH7 329 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SUSD6Q92537 303 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 EXOSC8Q96B26 276 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 GPR62Q9BZJ7 368 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 NAA50Q9GZZ1 169 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 PRDM8Q9NQV8 689 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 HEBP1Q9NRV9 189 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 RPL36Q9Y3U8 105 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 KRT87PA6NCN2 255 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MITFO75030 526 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SOCS5O75159 536 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CHRM5P08912 532 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SLC35G4P0C7Q5 338 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CCNYL3P0C7X3 344 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 BMP7P18075 431 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 GKP32189 559 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SDC2P34741 201 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MAGEA8P43361 318 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 APLP1P51693 650 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TAS2R41P59536 307 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 NPRL3Q12980 569 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 RAPSNQ13702 412 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 HEPACAMQ14CZ8 416 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CARD16Q5EG05 197 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 GPRC6AQ5T6X5 926 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TXNDC8Q6A555 127 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 HMBOX1Q6NT76 420 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 AGTRAPQ6RW13 159 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 RNF111Q6ZNA4 994 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MBOAT1Q6ZNC8 495 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MFSD6LQ8IWD5 586 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 OMA1Q96E52 524 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 COQ7Q99807 217 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 RMI1Q9H9A7 625 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TVP23BQ9NYZ1 205 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SNX7Q9UNH6 387 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MRPS7Q9Y2R9 242 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 PCDHB14Q9Y5E9 798 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ACTL7AQ9Y615 435 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SCN9AQ15858 1988 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 KIF13BQ9NQT8 1826 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 A0A1B0GW55 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TRBC2A0A5B9 178 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SAP18O00422 153 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 PI15O43692 258 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TGFB1P01137 390 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SRPRAP08240 638 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L2P0CJ85 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L3P0CJ86 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L4P0CJ87 422 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L5P0CJ88 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L6P0CJ89 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4L7P0CJ90 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 AGXTP21549 392 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CRHBPP24387 322 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 PPM1AP35813 382 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 RORCP51449 518 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF140P52738 457 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SRP54P61011 504 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 NCS1P62166 190 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 PRKCZQ05513 592 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 HSPB3Q12988 150 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CDK5R2Q13319 367 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MADCAM1Q13477 382 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 TSTQ16762 297 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ANKRD26P1Q6NSI1 321 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms