RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
HDAC8-213ENST00000436675 HCFC1P51610 2035 aa14.02□□□□□ -0.16
HDAC8-213ENST00000436675 OR2W5A6NFC9 320 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 FOXS1O43638 330 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 MFAP3LO75121 409 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 C8orf89P0DMQ9 161 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 CD1EP15812 388 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 CMPK1P30085 196 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 AP2B1P63010 937 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 TUBA3CQ13748 450 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 FASTKD1Q53R41 847 aaKnown RBP14.02□□□□□ -0.17
HDAC8-213ENST00000436675 KRTCAP3Q53RY4 240 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 ACER2Q5QJU3 275 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 PTRHD1Q6GMV3 140 aaKnown RBP14.02□□□□□ -0.17
HDAC8-213ENST00000436675 SPINK14Q6IE38 97 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 TUBA3EQ6PEY2 450 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 SUSD1Q6UWL2 747 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 ZNF534Q76KX8 674 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 MDS2Q8NDY4 140 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 METTL21AQ8WXB1 218 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 ZNF354BQ96LW1 612 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 TMEM121Q9BTD3 319 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 ENKD1Q9H0I2 346 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 KCNK13Q9HB14 408 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 PCDHGB6Q9Y5F9 930 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 KLK4Q9Y5K2 254 aa14.02□□□□□ -0.17
HDAC8-213ENST00000436675 FANCGO15287 622 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 ASNA1O43681 348 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 MAN1A2O60476 641 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 VPS26AO75436 327 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 MLYCDO95822 493 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 EEF1DP29692 281 aaKnown RBP14.01□□□□□ -0.17
HDAC8-213ENST00000436675 CD96P40200 585 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 GDF10P55107 478 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 SNRPNP63162 240 aaKnown RBP14.01□□□□□ -0.17
HDAC8-213ENST00000436675 OR1C1Q15619 314 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 TSTD2Q5T7W7 516 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 C11orf63Q6NUN7 778 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-213ENST00000436675 DOLPP1Q86YN1 238 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 CRLF3Q8IUI8 442 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 UTP23Q9BRU9 249 aaKnown RBP14.01□□□□□ -0.17
HDAC8-213ENST00000436675 TGIF2Q9GZN2 237 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 VN1R1Q9GZP7 353 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 MRPS30Q9NP92 439 aaKnown RBP14.01□□□□□ -0.17
HDAC8-213ENST00000436675 ABCF3Q9NUQ8 709 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 PPT2Q9UMR5 302 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 PCDHA3Q9Y5H8 950 aa14.01□□□□□ -0.17
HDAC8-213ENST00000436675 P2RX6O15547 441 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 PSMD3O43242 534 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 TJP3O95049 919 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
HDAC8-213ENST00000436675 CD46P15529 392 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 CTNNA1P35221 906 aaKnown RBP14□□□□□ -0.17
HDAC8-213ENST00000436675 GRIA1P42261 906 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 PRAMEP78395 509 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 OC90Q02509 493 aaPredicted RBP14□□□□□ -0.17
HDAC8-213ENST00000436675 MINDY4Q4G0A6 757 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 PPP1R21Q6ZMI0 780 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 GALNTL5Q7Z4T8 443 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 CPEB2Q7Z5Q1 589 aaKnown RBP14□□□□□ -0.17
HDAC8-213ENST00000436675 PAQR7Q86WK9 346 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 HMGCLL1Q8TB92 370 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 NRGNQ92686 78 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 MVB12AQ96EY5 273 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 FRMD6Q96NE9 622 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 CYTH2Q99418 400 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 NPAS2Q99743 824 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 PLCD4Q9BRC7 762 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 DRC3Q9H069 523 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 MARCH4Q9P2E8 410 aaPredicted RBP14□□□□□ -0.17
HDAC8-213ENST00000436675 ANAPC5Q9UJX4 755 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 EFR3BQ9Y2G0 817 aa14□□□□□ -0.17
HDAC8-213ENST00000436675 ABCA4P78363 2273 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 IGKV1-8A0A0C4DH67 115 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 ADAM10O14672 748 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-213ENST00000436675 GAS8O95995 478 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 HOXB4P17483 251 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-213ENST00000436675 PTPN7P35236 360 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 RPA3P35244 121 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-213ENST00000436675 PPARGP37231 505 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-213ENST00000436675 EMP3P54852 163 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 CDH17Q12864 832 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 P3H1Q32P28 736 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 PLAG1Q6DJT9 500 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 CEP128Q6ZU80 1094 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 OTOAQ7RTW8 1153 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 LINC00523Q86TU6 105 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 PLD3Q8IV08 490 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 SIAH3Q8IW03 269 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 OR9A4Q8NGU2 314 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 RERGQ96A58 199 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-213ENST00000436675 FAM136AQ96C01 138 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 SCMH1Q96GD3 660 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 FOPNLQ96NB1 174 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 DMRTA2Q96SC8 542 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 TRIM51Q9BSJ1 452 aa13.99□□□□□ -0.17
HDAC8-213ENST00000436675 CATSPERZQ9NTU4 200 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms