RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TEAD1P28347 426 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 S100A3P33764 101 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 RAE1P78406 368 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 BNIP2Q12982 314 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 E2F2Q14209 437 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 OGFRL1Q5TC84 451 aaPredicted RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 ANKRD26P1Q6NSI1 321 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 NXPE4Q6UWF7 544 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 GALNT13Q8IUC8 556 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 RIMKLAQ8IXN7 391 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 N4BP2L2Q92802 583 aaPredicted RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 AURKBQ96GD4 344 aaPredicted RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 FERD3LQ96RJ6 166 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 INPP5KQ9BT40 448 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 C1QTNF7Q9BXJ2 289 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 PRO3102Q9H379 93 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 FGF22Q9HCT0 170 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 IMP3Q9NV31 184 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 ACTR3BQ9P1U1 418 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 AK5Q9Y6K8 562 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 PRAMEF33A0A0G2JMD5 474 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 OR52A4PA6NMU1 304 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 PI15O43692 258 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 GBAP04062 536 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 OXTRP30559 389 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 TPMTP51580 245 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 EEFSECP57772 596 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 CLCA4Q14CN2 919 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 PYCR3Q53H96 274 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 OR4F3Q6IEY1 312 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 CAPRIN2Q6IMN6 1127 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 PDSS2Q86YH6 399 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 DRAXINQ8NBI3 349 aaPredicted RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 FCRL1Q96LA6 429 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 MENTQ9BUN1 341 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 THUMPD3Q9BV44 507 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 TRIT1Q9H3H1 467 aaKnown RBP16.07■□□□□ 0.16
USHBP1-203ENST00000431146 BRF2Q9HAW0 419 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 FZD4Q9ULV1 537 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 AURKCQ9UQB9 309 aa16.07■□□□□ 0.16
USHBP1-203ENST00000431146 HEATR5BQ9P2D3 2071 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 C15orf38-AP3S2A0A0A6YYH1 394 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 GPR89AB7ZAQ6 455 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 MBTPS2O43462 519 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 TIPRLO75663 272 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 GPR89BP0CG08 455 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CDKN2CP42773 168 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CLNS1AP54105 237 aaKnown RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CCINQ13939 588 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SKIV2LQ15477 1246 aaKnown RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 LCN8Q6JVE9 175 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 Q6ZS52 159 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 ARPINQ7Z6K5 226 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 TMEM102Q8N9M5 508 aaPredicted RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 HMGB4Q8WW32 186 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 FAM3CQ92520 227 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 ZUFSPQ96AP4 578 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 C11orf24Q96F05 449 aaPredicted RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 EFCAB11Q9BUY7 163 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 OR51B5Q9H339 312 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 XKR8Q9H6D3 395 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CAAP1Q9H8G2 361 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SERHLQ9NQF3 203 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CUEDC1Q9NWM3 386 aaPredicted RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 ACSL5Q9ULC5 683 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 RUVBL1Q9Y265 456 aaKnown RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 PCDHB14Q9Y5E9 798 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SNX13Q9Y5W8 968 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 V9GYQ6 96 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CACNB4O00305 520 aaPredicted RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 GABRG2P18507 467 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 EFNA1P20827 205 aaPredicted RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SLC7A1P30825 629 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 ZNF33BQ06732 778 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 UGT8Q16880 541 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 HKDC1Q2TB90 917 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 TPRG1LQ5T0D9 272 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 AMIGO2Q86SJ2 522 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 OR10A6Q8NH74 314 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 DNASE1L2Q92874 299 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 SH3KBP1Q96B97 665 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 WDR34Q96EX3 536 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 PAIP1Q9H074 479 aaKnown RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 CARS2Q9HA77 564 aaKnown RBP16.06■□□□□ 0.16
USHBP1-203ENST00000431146 PRDM8Q9NQV8 689 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 DTNAQ9Y4J8 743 aa16.06■□□□□ 0.16
USHBP1-203ENST00000431146 PDZK1P1A8MUH7 402 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 TPST1O60507 370 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 C1QCP02747 245 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 RPN2P04844 631 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 ANXA4P09525 319 aaPredicted RBP16.05■□□□□ 0.16
USHBP1-203ENST00000431146 HSD3B1P14060 373 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 HRH2P25021 359 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 HSD3B2P26439 372 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 DMPKQ09013 629 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms