RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CEP41Q9BYV8 373 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 POLE4Q9NR33 117 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PLK2Q9NYY3 685 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 PSMD13Q9UNM6 376 aa5.23□□□□□ -1.57
PTPN4-203ENST00000430976 AFF2P51816 1311 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM94Q12767 1356 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PLSCR5A0PG75 271 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PRAMEF22A3QJZ6 481 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 C5orf60A6NFR6 353 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 KHNYNO15037 678 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 UBDO15205 165 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RPP40O75818 363 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 NDUFA10O95299 355 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TNFRSF8P28908 595 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 S100A2P29034 98 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ECHS1P30084 290 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SLC1A4P43007 532 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 KIR3DL2P43630 455 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 HSPA7P48741 367 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 HMGCS1Q01581 520 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GRK1Q15835 563 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MAP1SQ66K74 1059 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RFWD3Q6PCD5 774 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MPZL3Q6UWV2 235 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CYS1Q717R9 158 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PPP1R3BQ86XI6 285 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FITM2Q8N6M3 262 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 BEND7Q8N7W2 519 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 OR11L1Q8NGX0 322 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FIBINQ8TAL6 211 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SUN3Q8TAQ9 357 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MAP4K1Q92918 833 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 C3orf49Q96BT1 292 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MASTLQ96GX5 879 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 IGSF21Q96ID5 467 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MTG1Q9BT17 334 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 IKZF4Q9H2S9 585 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CLEC4MQ9H2X3 399 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SLA2Q9H6Q3 261 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TRIM36Q9NQ86 728 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF302Q9NR11 478 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DPP3Q9NY33 737 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 STUB1Q9UNE7 303 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 BCS1LQ9Y276 419 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 NUP160Q12769 1436 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RFPL4AA6NLU0 287 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RFPL4AL1F8VTS6 287 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 K7EQM0 130 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 HCRTR2O43614 444 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 B4GALT2O60909 372 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 AKAP3O75969 853 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SORBS2O94875 1100 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PRF1P14222 555 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF250P15622 560 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ID1P41134 155 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SUMO3P55854 103 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DYNLL1P63167 89 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GCKRQ14397 625 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SPA17Q15506 151 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PDK4Q16654 411 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RBM48Q5RL73 367 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 BROXQ5VW32 411 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 OR5M10Q6IEU7 315 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM81Q6P7N7 255 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GCNT7Q6ZNI0 430 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ALYREFQ86V81 257 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 IFNEQ86WN2 208 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CNTN4Q8IWV2 1026 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TMEM132CQ8N3T6 1108 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FBXL13Q8NEE6 735 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 OR4Q3Q8NH05 313 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CHPT1Q8WUD6 406 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FAM136AQ96C01 138 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DUS3LQ96G46 650 aaKnown RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 FBXL20Q96IG2 436 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 LRCH3Q96II8 777 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 C12orf66Q96MD2 445 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF607Q96SK3 696 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 OR2AG1Q9H205 316 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PLK3Q9H4B4 646 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 RGCCQ9H4X1 137 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SOX17Q9H6I2 414 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GPN2Q9H9Y4 310 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PLCXD1Q9NUJ7 323 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TAS2R9Q9NYW1 312 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 ICKQ9UPZ9 632 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 KCNK6Q9Y257 313 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GAPVD1Q14C86 1478 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CCDC18Q5T9S5 1454 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 KCNK1O00180 336 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 NFIBO00712 420 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CFLARO15519 480 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 SUV39H1O43463 412 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 CA12O43570 354 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 TLX2O43763 284 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 DPM1O60762 260 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PFKFB1P16118 471 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 GM2AP17900 193 aa5.22□□□□□ -1.57
PTPN4-203ENST00000430976 PVALBP20472 110 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-203ENST00000430976 MARCKSP29966 332 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms