RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 RFXANKO14593 260 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 MMP20O60882 483 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 GMNNO75496 209 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 PRKD3O94806 890 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 C1QCP02747 245 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 GSNP06396 782 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 CA3P07451 260 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 HOXB6P17509 224 aaKnown RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 GPX2P18283 190 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 MTHFRP42898 656 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 MAGEA2P43356 314 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 TBPL1P62380 186 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 ROR2Q01974 943 aaKnown RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 LSAMPQ13449 338 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 PDGFRLQ15198 375 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 GALNT18Q6P9A2 607 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 SYT12Q8IV01 421 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 LAS2Q8IYD9 372 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 CPA6Q8N4T0 437 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 PJA1Q8NG27 643 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 NETO1Q8TDF5 533 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 CHFRQ96EP1 664 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 HDAC8Q9BY41 377 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 MTIF3Q9H2K0 278 aaKnown RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 DPEP2Q9H4A9 486 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 SFXN1Q9H9B4 322 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 SGK2Q9HBY8 427 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 CIDEBQ9UHD4 219 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 GPR34Q9UPC5 381 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 SH2B3Q9UQQ2 575 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 PCYT1BQ9Y5K3 369 aaPredicted RBP13.48□□□□□ -0.25
HOXC4-202ENST00000430889 CEPT1Q9Y6K0 416 aa13.48□□□□□ -0.25
HOXC4-202ENST00000430889 ANTXRLA6NF34 631 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 SEMG1P04279 462 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PCNAP12004 261 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 NPPBP16860 134 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF8P17098 575 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 FSHRP23945 695 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 RPL10P27635 214 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 GPR1P46091 355 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PPP2R2BQ00005 443 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ZZZ3Q8IYH5 903 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CFAP206Q8IYR0 622 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 HUS1BQ8NHY5 278 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 GFM2Q969S9 779 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 FAM162AQ96A26 154 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PPP1R16AQ96I34 528 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 EHD1Q9H4M9 534 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 GDE1Q9NZC3 331 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 THAP10Q9P2Z0 257 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 EXO1Q9UQ84 846 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 MAGED1Q9Y5V3 778 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 VEGFDO43915 354 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CLIC3O95833 236 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 LAMP1P11279 417 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ETS2P15036 469 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 P2RY2P41231 377 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 IL12RB1P42701 662 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ACSM2AQ08AH3 577 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 C10orf62Q5T681 223 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CPZQ66K79 652 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ACSM2BQ68CK6 577 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CAPN13Q6MZZ7 669 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ADAMTSL4Q6UY14 1074 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 FAM83HQ6ZRV2 1179 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PTOV1Q86YD1 416 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 SVOPLQ8N434 492 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 OR9A1PQ8NGU1 263 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CYGBQ8WWM9 190 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 STARD8Q92502 1023 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 TBC1D20Q96BZ9 403 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 COQ8BQ96D53 544 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 CHST8Q9H2A9 424 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 OR52A5Q9H2C5 316 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 SOX17Q9H6I2 414 aaPredicted RBP13.47□□□□□ -0.25
HOXC4-202ENST00000430889 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms