RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF563Q8TA94 476 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF689Q96CS4 500 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 METTL2AQ96IZ6 378 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 EBF3Q9H4W6 596 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 COQ10BQ9H8M1 238 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 PGM3O95394 542 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 FGF4P08620 206 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-208ENST00000430669 GSTM3P21266 225 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 ENPP7Q6UWV6 458 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 RAB2BQ8WUD1 216 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 PTBP2Q9UKA9 531 aaKnown RBP11.21□□□□□ -0.61
PTCH1-208ENST00000430669 NBNO60934 754 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 HLA-DQA2P01906 255 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 GJA1P17302 382 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 ENGP17813 658 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 DSC1Q08554 894 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 C16orf72Q14CZ0 275 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 FBXO43Q4G163 708 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 OR2T5Q6IEZ7 315 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 OR2T29Q8NH02 315 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
PTCH1-208ENST00000430669 B4GALT6Q9UBX8 382 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 IL7RP16871 459 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 KCNC1P48547 511 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 DPY19L3Q6ZPD9 716 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 FAM81AQ8TBF8 368 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 KCNC2Q96PR1 638 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 BHLHE41Q9C0J9 482 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-208ENST00000430669 PCDHGB1Q9Y5G3 927 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 A0A0G2JMZ2 1700 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 RLFQ13129 1914 aa11.21□□□□□ -0.61
PTCH1-208ENST00000430669 PRSS51A0A1B0GVH4 220 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 SAGP10523 405 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-208ENST00000430669 PIM1P11309 404 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-208ENST00000430669 RPL34P49207 117 aaKnown RBP11.21□□□□□ -0.62
PTCH1-208ENST00000430669 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.62
PTCH1-208ENST00000430669 FADDQ13158 208 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 GK3PQ14409 553 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM198Q66K66 360 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 NODALQ96S42 347 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 SH3GLB1Q9Y371 365 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 U3KQV3 271 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 ZCWPW2A0A1B0GU75 182 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 ASNA1O43681 348 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 SEC24AO95486 1093 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 AQP1P29972 269 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 ABATP80404 500 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 NPAS3Q8IXF0 933 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 HBEGFQ99075 208 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 MYOCQ99972 504 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 KLHL1Q9NR64 748 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM233B4DJY2 109 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 TBX10O75333 385 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 GADD45GO95257 159 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 ITGB1P05556 798 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 IL12BP29460 328 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 STAT5AP42229 794 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 TAF13Q15543 124 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM35AQ53FP2 167 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 HCAR2Q8TDS4 363 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 HERPUD2Q9BSE4 406 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 RERGLQ9H628 205 aa11.21□□□□□ -0.62
PTCH1-208ENST00000430669 CSNK2A2P19784 350 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CPN2P22792 545 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 ITGB7P26010 798 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MERTKQ12866 999 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 PTCHD3Q3KNS1 767 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 C2orf73Q8N5S3 287 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MROH6A6NGR9 719 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 SERPINI2O75830 405 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 G6PDP11413 515 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 ACP5P13686 325 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 UFM1P61960 85 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 WDR5P61964 334 aaKnown RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 SLC13A2Q13183 592 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MED22Q15528 200 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CEP68Q76N32 757 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 PHTF2Q8N3S3 785 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 POMGNT2Q8NAT1 580 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 BORCS5Q969J3 196 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 KCNN2Q9H2S1 579 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 RDH14Q9HBH5 336 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 KCTD3Q9Y597 815 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 TCRBV5S1A1TA0A578 114 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CAPN14A8MX76 684 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MAN2B1O00754 1011 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms