RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 SLC23A2Q9UGH3 650 aa8.11□□□□□ -1.11
CD44-208ENST00000428726 DMTF1Q9Y222 760 aa8.11□□□□□ -1.11
CD44-208ENST00000428726 OARD1Q9Y530 152 aa8.11□□□□□ -1.11
CD44-208ENST00000428726 LINC01553A4QN01 128 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 OR52A4PA6NMU1 304 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PRSS23O95084 383 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 OLFM2O95897 454 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CHRM5P08912 532 aaPredicted RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 TGFBR1P36897 503 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 MAPK8P45983 427 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PPM1FP49593 454 aaPredicted RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 MERTKQ12866 999 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 TTLL9Q3SXZ7 439 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 ZNF542PQ5EBM4 170 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FAM78AQ5JUQ0 283 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.1□□□□□ -1.11
CD44-208ENST00000428726 TANGO2Q6ICL3 276 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 AGTRAPQ6RW13 159 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FAM83HQ6ZRV2 1179 aaPredicted RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 THOC6Q86W42 341 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 SFTPA2Q8IWL1 248 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 FAM217AQ8IXS0 508 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CHCHD4Q8N4Q1 142 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 WDR48Q8TAF3 677 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 GIPC3Q8TF64 312 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FCRL4Q96PJ5 515 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PKP4Q99569 1192 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 HTATIP2Q9BUP3 242 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 MUC13Q9H3R2 512 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 RIBC2Q9H4K1 309 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 RC3H2Q9HBD1 1191 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 CAPN10Q9HC96 672 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CCM2LQ9NUG4 571 aaPredicted RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 C1orf109Q9NX04 203 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 KCTD5Q9NXV2 234 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ZIM2Q9NZV7 527 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 GULP1Q9UBP9 304 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FBXO10Q9UK96 956 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 MAFFQ9ULX9 164 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ABCG2Q9UNQ0 655 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 RBMX2Q9Y388 322 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 INSL6Q9Y581 213 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FAM234BA2RU67 622 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 IGLON5A6NGN9 336 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 SGTAO43765 313 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 FMO3P31513 532 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 BMPR1AP36894 532 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CRATP43155 626 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PLA2G16P53816 162 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PFN3P60673 137 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CHRNB3Q05901 458 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 DCTN2Q13561 401 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 TMEM240Q5SV17 173 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 LYPLAL1Q5VWZ2 237 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 LCN8Q6JVE9 175 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PSRC1Q6PGN9 363 aaPredicted RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 LIPIQ6XZB0 460 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 CCDC149Q6ZUS6 474 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 GPR141Q7Z602 305 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 METTL3Q86U44 580 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 CHERPQ8IWX8 916 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 FGF13Q92913 245 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 OSBPL11Q9BXB4 747 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 ACTR3BQ9P1U1 418 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 WARS2Q9UGM6 360 aaKnown RBP8.1□□□□□ -1.11
CD44-208ENST00000428726 IL36AQ9UHA7 158 aa8.1□□□□□ -1.11
CD44-208ENST00000428726 DYTNA2CJ06 578 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 H3BM21 787 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ANKRD28O15084 1053 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 KLK1P06870 262 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ADH5P11766 374 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ENGP17813 658 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 MAGP20916 626 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 NUBP1P53384 320 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 PRKAG1P54619 331 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 EMP3P54852 163 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SLC7A9P82251 487 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 GANABQ14697 944 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 COX20Q5RI15 118 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ANKFN1Q8N957 763 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 TRPV3Q8NET8 790 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 NELL1Q92832 810 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 EPB41L1Q9H4G0 881 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 ZNF696Q9H7X3 374 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 SH3GLB1Q9Y371 365 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 CCL27Q9Y4X3 112 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 TCF20Q9UGU0 1960 aaKnown RBP8.09□□□□□ -1.11
CD44-208ENST00000428726 A0A1W2PP55 124 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 J3KTA2 159 aa8.09□□□□□ -1.11
CD44-208ENST00000428726 CXCR6O00574 342 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms