RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TCRBV7S2A1N4TA0A589 114 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 GRID2IPA4D2P6 1211 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 A8MUI8 341 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 FAM227AF5H4B4 570 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 I3L1I5 382 aaPredicted RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 CD3EAPO15446 510 aaKnown RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 PHF2O75151 1096 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 NDUFS3O75489 264 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 WISP2O76076 250 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 IFNB1P01574 187 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 SSTR2P30874 369 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 RPA3P35244 121 aaPredicted RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 FDFT1P37268 417 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 SYT16Q17RD7 645 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 ZNF766Q5HY98 468 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 LRRC8BQ6P9F7 803 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 SUSD1Q6UWL2 747 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 PEX26Q7Z412 305 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 ZC3H7AQ8IWR0 971 aaKnown RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 ATG4AQ8WYN0 398 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 RERGQ96A58 199 aaPredicted RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 TUBB6Q9BUF5 446 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 DRC3Q9H069 523 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 SYNPO2LQ9H987 977 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 AMFRQ9UKV5 643 aa17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
UPK3BP1-201ENST00000428678 C8orf89P0DMQ9 161 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 EIF3BP55884 814 aaKnown RBP17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 GARNL3Q5VVW2 1013 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 TMEM205Q6UW68 189 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 PAQR7Q86WK9 346 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 LRRC6Q86X45 466 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 OTUD6BQ8N6M0 293 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 METTL21AQ8WXB1 218 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 SMPDL3AQ92484 453 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 PEX13Q92968 403 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 IMMP1LQ96LU5 166 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 LACRTQ9GZZ8 138 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 CHRAC1Q9NRG0 131 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 EPN1Q9Y6I3 576 aaPredicted RBP17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 GTF3C1Q12789 2109 aa17.35■□□□□ 0.37
UPK3BP1-201ENST00000428678 SOWAHDA6NJG2 315 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 BTNL10A8MVZ5 291 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 C19orf84I3L1E1 186 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 FOXS1O43638 330 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 SEC24DO94855 1032 aaPredicted RBP17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 AGAP20933 346 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 EFNA3P52797 238 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 MAT1AQ00266 395 aaKnown RBP17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 MFSD4BQ5TF39 518 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 FCRLBQ6BAA4 426 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 OR9A1PQ8NGU1 263 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 MTFMTQ96DP5 389 aaKnown RBP17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 TSPAN10Q9H1Z9 355 aaPredicted RBP17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 TSPY26PQ9H489 355 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 RAB6BQ9NRW1 208 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 UTP6Q9NYH9 597 aaKnown RBP17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 PCYOX1Q9UHG3 505 aa17.34■□□□□ 0.37
UPK3BP1-201ENST00000428678 IGHV3-20A0A0C4DH32 117 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 IGKV1-8A0A0C4DH67 115 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 ARHGEF33A8MVX0 844 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 TTI1O43156 1089 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 CLDN14O95500 239 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 APRTP07741 180 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 PKMP14618 531 aaKnown RBP17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 RPS3P23396 243 aaKnown RBP eCLIP17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 STIP1P31948 543 aaKnown RBP17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 CDSNQ15517 529 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 BTBD16Q32M84 506 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 ADCK2Q7Z695 626 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 BEST3Q8N1M1 668 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 MPP5Q8N3R9 675 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 FAM136AQ96C01 138 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 OR2A5Q96R48 311 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 VN1R1Q9GZP7 353 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 KLHL1Q9NR64 748 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 TAC3Q9UHF0 121 aa17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 MAP1AP78559 2803 aaPredicted RBP17.33■□□□□ 0.36
UPK3BP1-201ENST00000428678 MIF4GDA9UHW6 222 aaKnown RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 TXNDC9O14530 226 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 P2RX6O15547 441 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 CCNDBP1O95273 360 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 MATN4O95460 622 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 MLYCDO95822 493 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 FTCDO95954 541 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ERGP11308 486 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 EZRP15311 586 aaKnown RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 KIR3DL1P43629 444 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 SESN2P58004 480 aaPredicted RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 KRTAP10-9P60411 292 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 CRADDP78560 199 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ALDH6A1Q02252 535 aaKnown RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 MINDY4Q4G0A6 757 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 PCID2Q5JVF3 399 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 CTSL3PQ5NE16 218 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ACER2Q5QJU3 275 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ICE2Q659A1 982 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms